Janja Filipi

Dr. Janja Filipi

orcid

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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11 February 2021 in Remote Sensing
Verified
Journal Article
Open access
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VSVladan Stojnic
Vladan Stojnic
VRVladimir Risojević
Vladimir Risojević
Mario MuštraMario Muštra
Mario Muštra
VJVedran Jovanović
Vedran Jovanović
JFJanja Filipi
Janja Filipi
ZBZdenka Babic
Zdenka Babic
Detection of small moving objects is an important research area with applications including monitoring of flying insects, studying their foraging behavior, using insect pollinators to monitor flowering and pollination of crops, surveillance of honeybee colonies, and tracking movement of honeybees. However, due to the lack of distinctive shape and textural details on small objects, direct application of modern object detection methods based on convolutional neural networks (CNNs) shows considerably lower performance. In this paper we propose a method for the detection of small moving objects in videos recorded using unmanned aerial vehicles equipped with standard video cameras. The main steps of the proposed method are video stabilization, background estimation and subtraction, frame segmentation using a CNN, and thresholding the segmented frame. However, for training a CNN it is required that a large labeled dataset is available. Manual labelling of small moving objects in videos is very difficult and time consuming, and such labeled datasets do not exist at the moment. To circumvent this problem, we propose training a CNN using synthetic videos generated by adding small blob-like objects to video sequences with real-world backgrounds. The experimental results on detection of flying honeybees show that by using a combination of classical computer vision techniques and CNNs, as well as synthetic training sets, the proposed approach overcomes the problems associated with direct application of CNNs to the given problem and achieves an average F1-score of 0.86 in tests on real-world videos.

2 November 2021 in Insects
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Journal Article
Open access
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RBRobert Brodschneider
Robert Brodschneider
EKElfriede Kalcher-Sommersguter
Elfriede Kalcher-Sommersguter
SKSabrina Kuchling
Sabrina Kuchling
VDVincent Dietemann
Vincent Dietemann
Alison GrayAlison Gray
Alison Gray
JSJozef J.M. Jozef Van Der Steen
Jozef J.M. Jozef Van Der Steen
A diverse supply of pollen is an important factor for honey bee health, but information about the pollen diversity available to colonies at the landscape scale is largely missing. In this COLOSS study, beekeeper citizen scientists sampled and analyzed the diversity of pollen collected by honey bee colonies. As a simple measure of diversity, beekeepers determined the number of colors found in pollen samples that were collected in a coordinated and standardized way. Altogether, 750 beekeepers from 28 different regions from 24 countries participated in the two-year study and collected and analyzed almost 18,000 pollen samples. Pollen samples contained approximately six different colors in total throughout the sampling period, of which four colors were abundant. We ran generalized linear mixed models to test for possible effects of diverse factors such as collection, i.e., whether a minimum amount of pollen was collected or not, and habitat type on the number of colors found in pollen samples. To identify habitat effects on pollen diversity, beekeepers’ descriptions of the surrounding landscape and CORINE land cover classes were investigated in two different models, which both showed that both the total number and the rare number of colors in pollen samples were positively affected by ‘urban’ habitats or ‘artificial surfaces’, respectively. This citizen science study underlines the importance of the habitat for pollen diversity for bees and suggests higher diversity in urban areas.

1 June 2021 in Chemosphere
Verified
Journal Article
Closed access
Ross GillandersRoss Gillanders
Ross Gillanders
JGJames Me. Glackin
James Me. Glackin
ZBZdenka Babić
Zdenka Babić
MMMario Muštra
Mario Muštra
Mitar SimićMitar Simić
Mitar Simić
JFJanja Filipi
Janja Filipi

3 November 2022 in Viruses
Verified
Journal Article
Open access
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DBDavid Claeys Bouuaert
David Claeys Bouuaert
LSLina De Smet
Lina De Smet
MBMarleen Brunain
Marleen Brunain
BDBjørn Dahle
Bjørn Dahle
TBTjeerd Blacquière
Tjeerd Blacquière
Dirk de GraafDirk de Graaf
Dirk de Graaf
Monitoring virus infections can be an important selection tool in honey bee breeding. A recent study pointed towards an association between the virus-free status of eggs and an increased virus resistance to deformed wing virus (DWV) at the colony level. In this study, eggs from both naturally surviving and traditionally managed colonies from across Europe were screened for the prevalence of different viruses. Screenings were performed using the phenotyping protocol of the ‘suppressed in ovo virus infection’ trait but with qPCR instead of end-point PCR and a primer set that covers all DWV genotypes. Of the 213 screened samples, 109 were infected with DWV, 54 were infected with black queen cell virus (BQCV), 3 were infected with the sacbrood virus, and 2 were infected with the acute bee paralyses virus. It was demonstrated that incidences of the vertical transmission of DWV were more frequent in naturally surviving than in traditionally managed colonies, although the virus loads in the eggs remained the same. When comparing virus infections with queen age, older queens showed significantly lower infection loads of DWV in both traditionally managed and naturally surviving colonies, as well as reduced DWV infection frequencies in traditionally managed colonies. We determined that the detection frequencies of DWV and BQCV in honey bee eggs were lower in samples obtained in the spring than in those collected in the summer, indicating that vertical transmission may be lower in spring. Together, these patterns in vertical transmission show that honey bee queens have the potential to reduce the degree of vertical transmission over time.

29 June 2021 in Bee World
Verified
Journal Article
Closed access
Fani HatjinaFani Hatjina
Fani Hatjina
NANoureddine Adjlane
Noureddine Adjlane
LCLeonidas Charistos
Leonidas Charistos
RDRaffaele Dall’oLio
Raffaele Dall’oLio
MDMarica Maja Dražić
Marica Maja Dražić
NKNikola Kezic
Nikola Kezic
The varroa mite (Varroa destructor), a complex ectoparasite with a very distinctive biology (Rosenkranz et al., 2010) is considered a key pest affecting beekeeping and honey bee health worldwide (T...

11 June 2024 in Journal of Apicultural Research
Verified
Journal Article
Closed access
SPSamuel Perichon
Samuel Perichon
Leonora AdamchukLeonora Adamchuk
Leonora Adamchuk
LBLejla Biber
Lejla Biber
JBJanko Božič
Janko Božič
RCRobert Chlebo
Robert Chlebo
AZAleksejs Zacepins
Aleksejs Zacepins