Samuel Paiva

Dr. Samuel Paiva

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Research Focus & Metrics

Academic Career Length

25Years (2002-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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7 February 2012 in PLOS Biology
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Journal Article
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JKJames W Kijas
James W Kijas
JLJohannes A. Lenstra
Johannes A. Lenstra
BHBen Hayes
Ben Hayes
SBSimon Boitard
Simon Boitard
LNLaercio R Porto Neto
Laercio R Porto Neto
IMInternational Sheep Genomics Consortium Members
International Sheep Genomics Consortium Members
Through their domestication and subsequent selection, sheep have been adapted to thrive in a diverse range of environments. To characterise the genetic consequence of both domestication and selection, we genotyped 49,034 SNP in 2,819 animals from a diverse collection of 74 sheep breeds. We find the majority of sheep populations contain high SNP diversity and have retained an effective population size much higher than most cattle or dog breeds, suggesting domestication occurred from a broad genetic base. Extensive haplotype sharing and generally low divergence time between breeds reveal frequent genetic exchange has occurred during the development of modern breeds. A scan of the genome for selection signals revealed 31 regions containing genes for coat pigmentation, skeletal morphology, body size, growth, and reproduction. We demonstrate the strongest selection signal has occurred in response to breeding for the absence of horns. The high density map of genetic variability provides an in-depth view of the genetic history for this important livestock species. During the process of domestication, mankind recruited animals from the wild into a captive environment, changing their morphology, behaviour, and genetics. In the case of sheep, domestication and subsequent selection by their animal handlers over thousands of years has produced a spectrum of breeds specialised for the production of wool, milk, and meat. We sought to use this population history to search for the genes that directly underpin phenotypic variation. We collected DNA from 2,819 sheep, belonging to 74 breeds sampled from around the world, and assessed the genotype of each animal at nearly 50,000 locations across the genome. Our results show that sheep breeds have maintained high levels of genetic diversity, in contrast to other domestic animals such as dogs. We also show that particular regions of the genome contain strong evidence for accelerated change in response to artificial selection. The most prominent example was identified in response to breeding for the absence of horns, a trait now common across many modern breeds. Furthermore, we demonstrate that other genomic regions under selection in sheep contain genes controlling pigmentation, reproduction, and body size.

9 April 2008 in Tropical Animal Health and Production
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Journal Article
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CMConcepta Mcmanus
Concepta Mcmanus
GPGiane Regina Paludo
Giane Regina Paludo
HLHelder Louvandini
Helder Louvandini
RGRosilene Gugel
Rosilene Gugel
LSLuiz Cláudio Bastos Sasaki
Luiz Cláudio Bastos Sasaki
SPSamuel Paiva
Samuel Paiva
Thirty Santa Ines adult, non-lactating, non-pregnant ewes, ten with a brown coat, ten black coated and ten white coated, as well as ten Bergamasca and ten of mixed breed were used to evaluate the effect of climate on physiological and blood parameters in sheep. Two sample collections were taken (6 am and 2 pm) on six days. Sweating rate (SR), heart (HR) and breathing rates (BR), complete hemogram, rectal (RT) and skin temperatures (ST) were measured. Variance analyses were carried out using SAS®. In general, there were significant differences between animals due to skin type, time and day of collection. White coated animals showed lower HR, BR and RT, with afternoon parameters higher than morning. Correlations between HR, BR, RT, SR and ST were medium and positive. Correlations between physiological and blood traits were in general negative and medium. Packed Cell Volume (PCV), total plasma proteins, red blood cell count and hemoglobin concentration had high positive correlations between each other. The first two autovectors explained 49% of variation between traits. White coated Santa Ines animals were shown to be better adapted to climatic conditions in Central Brazil and wool sheep more affected by heat.

11 January 2011 in Animal Genetics
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Journal Article
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BSB. D. M. Silva
B. D. M. Silva
ECE. A. Castro
E. A. Castro
CSC. J. H. Souza
C. J. H. Souza
SPSamuel Paiva
Samuel Paiva
RSRoberto Sartori
Roberto Sartori
EME. O. Melo
E. O. Melo

1 October 2020 in Theriogenology
Verified
Journal Article
Closed access
CMConcepta Mcmanus
Concepta Mcmanus
DFDanielle Assis Faria
Danielle Assis Faria
CLCarolina Lucci
Carolina Lucci
HLHelder Louvandini
Helder Louvandini
SPSidney A. Pereira
Sidney A. Pereira
SPSamuel Paiva
Samuel Paiva

1 July 2010 in Revista Brasileira de Zootecnia
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CMConcepta Mcmanus
Concepta Mcmanus
SPSamuel Paiva
Samuel Paiva
RARonyere Olegário de Araújo
Ronyere Olegário de Araújo
Studies in genetics and breeding of sheep in Brazil have increased significantly in recent years. These involve research in characterization, breeding and crossing sheep using new technologies available incorporating both classical quantitative and molecular genetics. Improvements in statistical techniques, computational resources as well as analysis of DNA and gaps in present knowledge and opportunities for possible research are pointed out. There is a need for greater interaction between various groups working in the country as well as interactions with other disciplines such as Geographical Information Systems, Statistics, Bioinformatics, as well as biological studies such as physiology and proteomics.

2 August 2010 in Tropical Animal Health and Production
Verified
Journal Article
Open access
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CMConcepta Mcmanus
Concepta Mcmanus
HLHelder Louvandini
Helder Louvandini
RGRosilene Gugel
Rosilene Gugel
LSLuiz Cláudio Bastos Sasaki
Luiz Cláudio Bastos Sasaki
EBEliandra Bianchini
Eliandra Bianchini
TPTiago Paim
Tiago Paim
The objective of this study was to evaluate and compare physical parameters in groups of sheep with different phenotypic characteristics in the Centre-west region of Brazil. Five groups of sheep, with nine animals per group, were selected, three groups of Santa Inês animals with different coat colours (white, brown and black), one group with crossbred animals (Santa Inês × Bergamasca) and one group with animals of the Bergamasca breed. The following traits were evaluated: coat thickness, number and length of hair, pigmentation level in the coat and the skin as well as the percentage area of sweats glands in the skin tissue, carried out by histological analysis. The number of hairs and the area of sweats glands were not significantly different between the evaluated groups. The Bergamasca breed showed low pigmentation of the skin and long hairs. The levels of pigmentation of the hair and of the skin were highly correlated. Between the Santa Inês groups, the group with white hair showed the better parameters for heat adaptation, while the brown hair group showed the lower heat adaptation when compared with another hair breed groups.