Tae Joon Jun

Dr. Tae Joon Jun


Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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18 November 2024 in JMIR Medical Informatics
Verified
Journal Article
Open access
HCHa Na Cho
Ha Na Cho
TJTae Joon Jun
Tae Joon Jun
YKYoung-Hak Kim
Young-Hak Kim
HKHeejun Kang
Heejun Kang
IAImjin Ahn
Imjin Ahn
SKSoyoung Ko
Soyoung Ko
Background: Transformer-based language models have shown great potential to revolutionize health care by advancing clinical decision support, patient interaction, and disease prediction. However, despite their rapid development, the implementation of transformer-based language models in health care settings remains limited. This is partly due to the lack of a comprehensive review, which hinders a systematic understanding of their applications and limitations. Without clear guidelines and consolidated information, both researchers and physicians face difficulties in using these models effectively, resulting in inefficient research efforts and slow integration into clinical workflows. Objective: This scoping review addresses this gap by examining studies on medical transformer-based language models and categorizing them into 6 tasks: dialogue generation, question answering, summarization, text classification, sentiment analysis, and named entity recognition. Methods: We conducted a scoping review following the Cochrane scoping review protocol. A comprehensive literature search was performed across databases, including Google Scholar and PubMed, covering publications from January 2017 to September 2024. Studies involving transformer-derived models in medical tasks were included. Data were categorized into 6 key tasks. Results: Our key findings revealed both advancements and critical challenges in applying transformer-based models to health care tasks. For example, models like MedPIR involving dialogue generation show promise but face privacy and ethical concerns, while question-answering models like BioBERT improve accuracy but struggle with the complexity of medical terminology. The BioBERTSum summarization model aids clinicians by condensing medical texts but needs better handling of long sequences. Conclusions: This review attempted to provide a consolidated understanding of the role of transformer-based language models in health care and to guide future research directions. By addressing current challenges and exploring the potential for real-world applications, we envision significant improvements in health care informatics. Addressing the identified challenges and implementing proposed solutions can enable transformer-based language models to significantly improve health care delivery and patient outcomes. Our review provides valuable insights for future research and practical applications, setting the stage for transformative advancements in medical informatics.

1 August 2020 in Neural Networks
Verified
Journal Article
Closed access
TJTae Joon Jun
Tae Joon Jun
JKJihoon Kweon
Jihoon Kweon
YKYoung-Hak Kim
Young-Hak Kim
DKDae Young Kim
Dae Young Kim

14 November 2018 in Medical & Biological Engineering & Computing
Verified
Journal Article
Closed access
PDF file
TJTae Joon Jun
Tae Joon Jun
SKSoo-Jin Kang
Soo-Jin Kang
JLJune-Goo Lee
June-Goo Lee
JKJihoon Kweon
Jihoon Kweon
WNWonjun Na
Wonjun Na
YKYoung-Hak Kim
Young-Hak Kim

1 September 2021 in Computer Methods and Programs in Biomedicine
Verified
Journal Article
Closed access
JYJungsun Yoo
Jungsun Yoo
TJTae Joon Jun
Tae Joon Jun
YKYoung-Hak Kim
Young-Hak Kim

17 November 2021 in JMIR Medical Informatics
Verified
Journal Article
Open access
IAImjin Ahn
Imjin Ahn
HGHansle Gwon
Hansle Gwon
HKHeejun Kang
Heejun Kang
YKYunha Kim
Yunha Kim
HSHyeram Seo
Hyeram Seo
YKYoung-Hak Kim
Young-Hak Kim
Background: Effective resource management in hospitals can improve the quality of medical services by reducing labor-intensive burdens on staff, decreasing inpatient waiting time, and securing the optimal treatment time. The use of hospital processes requires effective bed management; a stay in the hospital that is longer than the optimal treatment time hinders bed management. Therefore, predicting a patient’s hospitalization period may support the making of judicious decisions regarding bed management. Objective: First, this study aims to develop a machine learning (ML)–based predictive model for predicting the discharge probability of inpatients with cardiovascular diseases (CVDs). Second, we aim to assess the outcome of the predictive model and explain the primary risk factors of inpatients for patient-specific care. Finally, we aim to evaluate whether our ML-based predictive model helps manage bed scheduling efficiently and detects long-term inpatients in advance to improve the use of hospital processes and enhance the quality of medical services. Methods: We set up the cohort criteria and extracted the data from CardioNet, a manually curated database that specializes in CVDs. We processed the data to create a suitable data set by reindexing the date-index, integrating the present features with past features from the previous 3 years, and imputing missing values. Subsequently, we trained the ML-based predictive models and evaluated them to find an elaborate model. Finally, we predicted the discharge probability within 3 days and explained the outcomes of the model by identifying, quantifying, and visualizing its features. Results: We experimented with 5 ML-based models using 5 cross-validations. Extreme gradient boosting, which was selected as the final model, accomplished an average area under the receiver operating characteristic curve score that was 0.865 higher than that of the other models (ie, logistic regression, random forest, support vector machine, and multilayer perceptron). Furthermore, we performed feature reduction, represented the feature importance, and assessed prediction outcomes. One of the outcomes, the individual explainer, provides a discharge score during hospitalization and a daily feature influence score to the medical team and patients. Finally, we visualized simulated bed management to use the outcomes. Conclusions: In this study, we propose an individual explainer based on an ML-based predictive model, which provides the discharge probability and relative contributions of individual features. Our model can assist medical teams and patients in identifying individual and common risk factors in CVDs and can support hospital administrators in improving the management of hospital beds and other resources.

19 November 2023 in Computers in Biology and Medicine
Verified
Journal Article
Closed access
HGHansle Gwon
Hansle Gwon
IAImjin Ahn
Imjin Ahn
YKYunha Kim
Yunha Kim
HKHee Jun Kang
Hee Jun Kang
HSHyeram Seo
Hyeram Seo
YKYoung-Hak Kim
Young-Hak Kim