Mediterranean biomes are biodiversity hotspots, and vineyards are important components of the Mediterranean landscape. Over the last few decades, the amount of land occupied by vineyards has augmented rapidly, thereby increasing threats to Mediterranean ecosystems. Land use change and agricultural management have important effects on soil biodiversity, because they change the physical and chemical properties of soil. These changes may also have consequences on wine production considering that soil is a key component ofterroir. Here, we describe the taxonomic diversity and metabolic functions of bacterial and fungal communities present in forest and vineyard soils in Chile. To accomplish this goal, we collected soil samples from organic vineyards in central Chile and employed a shotgun metagenomic approach to sequence the microbial DNA. Additionally, we studied the surrounding native forest to obtain a baseline of the soil conditions in the area prior to the establishment of the vineyard. Our metagenomic analyses revealed that both habitats shared most of the soil microbial species. The most abundant genera in the two habitats were the bacteriaCandidatus SolibacterandBradyrhizobiumand the fungusGibberella. Our results suggest that the soil microbial communities are similar in these forests and vineyards. Therefore, we hypothesize that native forests surrounding the vineyards may be acting as a microbial reservoir buffering the effects of the land conversion. Regarding the metabolic diversity, we found that genes pertaining to the metabolism of amino acids, fatty acids, and nucleotides as well as genes involved in secondary metabolism were enriched in forest soils. On the other hand, genes related to miscellaneous functions were more abundant in vineyard soils. These results suggest that the metabolic function of microbes found in these habitats differs, though differences are not related to taxonomy. Finally, we propose that the implementation of environmentally friendly practices by the wine industry may help to maintain the microbial diversity and ecosystem functions associated with natural habitats.
Summary: 1. An increasing body of knowledge suggests that the estimation of critical upper thermal limits (CTmax) is highly dependent on the experimental methodology employed. Here, we employ a theoretical approach to analyse how estimates of CTmax(knock‐down temperatures and times) are affected by measurement protocol.2. Our model is able to reproduce the results of empirical studies onDrosophila melanogaster, suggesting that it adequately mimics organismal responses during assays. With simulated data sets, we also show that many experimental protocols result in unreliable and often highly biased estimates of CTmaxinDrosophilaand possibly in other ectotherms.3. The confounding effects of stochasticity, resource depletion (or fatigue) and short‐term acclimatory responses are expected to be higher in longer assays, and therefore, short assays should be generally preferred. The experimental protocol of choice must also take into consideration the range in which measurement accuracy is not affected and the potential problems of thermal inertia in larger organisms.4. Our findings justify previous concerns that the methodology may have a greater impact on estimates of CTmaxthan the biological process under study, and explain why many studies on the subject have often reported inconsistent and even contradictory results.
SUMMARY Herbivorous insects have developed mechanisms to cope with plant barriers, including enzymatic systems to detoxify plant allelochemicals. Detoxification systems may be induced when insects are feeding on plants with increasing levels of allelochemicals. Increases in enzymatic activity have been related to energetic costs, and therefore less energy may be allocated to fitness-related traits. In this study, we explored the induction and energetic costs of detoxifying hydroxamic acids (Hx; a wheat allelochemical) in the grain aphid, Sitobion avenae. Aphids were reared on three wheat cultivars with different levels of Hx (0.26±0.08, 2.09±0.6 and 5.91±1.18 mmol kg–1 fresh mass). We performed a nested ANOVA to test the effect of Hx (main factor) and intrahost variation (nested factor) on body mass, standard metabolic rate (SMR) and the enzymatic activity of cytochrome P450s monooxygenases (P450s), glutathione S-transferases (GSTs) and esterases (ESTs). We found non-significant effects of Hx levels (P>0.5 for all tests), but there was significant intrahost variation (P0.05). These results suggest that increased enzymatic activities do not entail increased metabolic rate. Therefore, low energetic costs in aphids would facilitate the use of different hosts and promote a wider ecological niche.