Zbigniew Sroka

Prof. Zbigniew Sroka

orcid

Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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7 July 2020 in Molecules
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Journal Article
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MSMaciej Spiegel
Maciej Spiegel
KKKarina Kapusta
Karina Kapusta
WKWojciech Kolodziejczyk
Wojciech Kolodziejczyk
JSJulia Saloni
Julia Saloni
BŻBeata Żbikowska
Beata Żbikowska
ZSZbigniew Sroka
Zbigniew Sroka
Phenolic acids are naturally occurring compounds that are known for their antioxidant and antiradical activity. We present experimental and theoretical studies on the antioxidant potential of the set of 22 phenolic acids with different models of hydroxylation and methoxylation of aromatic rings. Ferric reducing antioxidant power assay was used to evaluate this property. 2,3-dihydroxybenzoic acid was found to be the strongest antioxidant, while mono hydroxylated and methoxylated structures had the lowest activities. A comprehensive structure–activity investigation with density functional theory methods elucidated the influence of compounds topology, resonance stabilization, and intramolecular hydrogen bonding on the exhibited activity. The key factor was found to be a presence of two or more hydroxyl groups being located in ortho or para position to each other. Finally, the quantitative structure–activity relationship approach was used to build a multiple linear regression model describing the dependence of antioxidant activity on structure of compounds, using features exclusively related to their topology. Coefficients of determination for training set and for the test set equaled 0.9918 and 0.9993 respectively, and Q2 value for leave-one-out was 0.9716. In addition, the presented model was used to predict activities of phenolic acids that haven’t been tested here experimentally.

27 May 2020 in Antioxidants
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Journal Article
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MSMaciej Spiegel
Maciej Spiegel
TATadeusz Andruniów
Tadeusz Andruniów
ZSZbigniew Sroka
Zbigniew Sroka
Flavonoids are known for their antiradical capacity, and this ability is strongly structure-dependent. In this research, the activity of flavones and flavonols in a water solvent was studied with the density functional theory methods. These included examination of flavonoids’ molecular and radical structures with natural bonding orbitals analysis, spin density analysis and frontier molecular orbitals theory. Calculations of determinants were performed: specific, for the three possible mechanisms of action—hydrogen atom transfer (HAT), electron transfer–proton transfer (ETPT) and sequential proton loss electron transfer (SPLET); and the unspecific—reorganization enthalpy (RE) and hydrogen abstraction enthalpy (HAE). Intramolecular hydrogen bonding, catechol moiety activity and the probability of electron density swap between rings were all established. Hydrogen bonding seems to be much more important than the conjugation effect, because some structures tends to form more intramolecular hydrogen bonds instead of being completely planar. The very first hydrogen abstraction mechanism in a water solvent is SPLET, and the most privileged abstraction site, indicated by HAE, can be associated with the C3 hydroxyl group of flavonols and C4’ hydroxyl group of flavones. For the catechol moiety, an intramolecular reorganization to an o-benzoquinone-like structure occurs, and the ETPT is favored as the second abstraction mechanism.

19 October 2022 in Food Chemistry
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Journal Article
Open access
MSMaciej Spiegel
Maciej Spiegel
KCKatarzyna Cel
Katarzyna Cel
ZSZbigniew Sroka
Zbigniew Sroka
Polyphenols are the most widely intake exogenous antioxidants. Their properties prevent the accumulation of radicals in the body and the development of oxidative stress, a recognized trigger for some diseases and a manifestation of others. Nonetheless, apart from their beneficial effects, polyphenols might also exhibit prooxidant potential, often observed as the oxidation of transition state metals, resulting in amplified radical production. DFT studies at the B3LYP/6-311++G(d,p) level of theory were conducted on nine common polyphenolic compounds to assess both activities in physiologically relevant media. It has been found that there is a fine line between antioxidant and prooxidant character, and increasing pH values promote the occurrence of the latter. Anthocyanidins proved to be the most potent radical scavengers, particularly under slightly alkaline conditions, followed by flavonoids and phenolic acids last. Antiradical activity is better in a polar solvent than in apolar one, due to the possibility of dissociation.

11 November 2015 in Journal of Molecular Modeling
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ZSZbigniew Sroka
Zbigniew Sroka
BŻBeata Żbikowska
Beata Żbikowska
JHJerzy Hładyszowski
Jerzy Hładyszowski

20 August 2021 in Molecules
Verified
Journal Article
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MSMaciej Spiegel
Maciej Spiegel
AGAndrzej Gamian
Andrzej Gamian
ZSZbigniew Sroka
Zbigniew Sroka
Polyphenolic compounds are now widely studied using computational chemistry approaches, the most popular of which is Density Functional Theory. To ease this process, it is critical to identify the optimal level of theory in terms of both accuracy and resource usage—a challenge we tackle in this study. Eleven DFT functionals with varied Hartree–Fock exchange values, both global and range-separated hybrids, were combined with 14 differently augmented basis sets to calculate the reactivity indices of caffeic acid, a phenolic acid representative, and compare them to experimental data or a high-level of theory outcome. Aside from the main course, a validation of the widely used Janak’s theorem in the establishment of vertical ionization potential and vertical electron affinity was evaluated. To investigate what influences the values of the properties under consideration, linear regression models were developed and thoroughly discussed. The results were utilized to compute the scores, which let us determine the best and worst combinations and make broad suggestions on the final option. The study demonstrates that M06–2X/6–311G(d,p) is the best fit for such research, and, curiously, it is not necessarily essential to include a diffuse function to produce satisfactory results.

25 May 2018 in Molecules
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POPiotr Okińczyc
Piotr Okińczyc
Antoni Jacek SzumnyAntoni Jacek Szumny
Antoni Jacek Szumny
JSJakub Szperlik
Jakub Szperlik
AKAnna Kulma
Anna Kulma
RFRoman Franiczek
Roman Franiczek
ZSZbigniew Sroka
Zbigniew Sroka
In this work, we studied similarities and differences between 70% ethanol in water extract (70EE) and essential oils (EOs) obtained from propolis, black poplars (Populus nigra L.) and aspens (P. tremula L.) to ascertain which of these is a better indicator of the plant species used by bees to collect propolis precursors. Composition of 70EE was analyzed by UPLC-PDA-MS, while GC-MS was used to research the EOs. Principal component analyses (PCA) and calculations of Spearman’s coefficient rank were used for statistical analysis. Statistical analysis exhibited correlation between chemical compositions of propolis and Populus buds’ 70EE. In the case of EOs, results were less clear. Compositions of black poplars, aspens EOs and propolises have shown more variability than 70EE. Different factors such as higher instability of EOs compared to 70EE, different degradation pattern of benzyl esters to benzoic acid, differences in plant metabolism and bees’ preferences may be responsible for these phenomena. Our research has therefore shown that 70EE of propolis reflected the composition of P. nigra or complex aspen–black poplar origin.