James Grist

Dr. James Grist

Department of Physiology, Anatomy, and Genetics, University of Oxford, Oxford, UK
orcid

Research Focus & Metrics

Academic Career Length

9Years (2018-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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26 February 2018 in Nature Human Behaviour
Verified
Journal Article
Open access
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DLDaniel Lakens
Daniel Lakens
FAFederico G. Adolfi
Federico G. Adolfi
CACasper J. Albers
Casper J. Albers
FAFarid Anvari
Farid Anvari
MAMatthew A. J. Apps
Matthew A. J. Apps
RZRolf A. Zwaan
Rolf A. Zwaan
In response to recommendations to redefine statistical significance to P ≤ 0.005, we propose that researchers should transparently report and justify all choices they make when designing a study, including the alpha level.

21 January 2020 in Proceedings of the National Academy of Sciences
Verified
Journal Article
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FGFerdia Gallagher
Ferdia Gallagher
Ramona WoitekRamona Woitek
Ramona Woitek
MMMary A. McLean
Mary A. McLean
AGAndrew B. Gill
Andrew B. Gill
RGRaquel Manzano Garcia
Raquel Manzano Garcia
KBKevin M. Brindle
Kevin M. Brindle
Our purpose is to investigate the feasibility of imaging tumor metabolism in breast cancer patients using 13 C magnetic resonance spectroscopic imaging (MRSI) of hyperpolarized 13 C label exchange between injected [1- 13 C]pyruvate and the endogenous tumor lactate pool. Treatment-naïve breast cancer patients were recruited: four triple-negative grade 3 cancers; two invasive ductal carcinomas that were estrogen and progesterone receptor-positive (ER/PR+) and HER2/neu-negative (HER2−), one grade 2 and one grade 3; and one grade 2 ER/PR+ HER2− invasive lobular carcinoma (ILC). Dynamic 13 C MRSI was performed following injection of hyperpolarized [1- 13 C]pyruvate. Expression of lactate dehydrogenase A (LDHA), which catalyzes 13 C label exchange between pyruvate and lactate, hypoxia-inducible factor-1 (HIF1α), and the monocarboxylate transporters MCT1 and MCT4 were quantified using immunohistochemistry and RNA sequencing. We have demonstrated the feasibility and safety of hyperpolarized 13 C MRI in early breast cancer. Both intertumoral and intratumoral heterogeneity of the hyperpolarized pyruvate and lactate signals were observed. The lactate-to-pyruvate signal ratio (LAC/PYR) ranged from 0.021 to 0.473 across the tumor subtypes (mean ± SD: 0.145 ± 0.164), and a lactate signal was observed in all of the grade 3 tumors. The LAC/PYR was significantly correlated with tumor volume ( R = 0.903, P = 0.005) and MCT 1 ( R = 0.85, P = 0.032) and HIF1α expression ( R = 0.83, P = 0.043). Imaging of hyperpolarized [1- 13 C]pyruvate metabolism in breast cancer is feasible and demonstrated significant intertumoral and intratumoral metabolic heterogeneity, where lactate labeling correlated with MCT1 expression and hypoxia.

1 April 2019 in NeuroImage
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Journal Article
Open access
James GristJames Grist
James Grist
MMMary A. McLean
Mary A. McLean
FRFrank Riemer
Frank Riemer
RSRolf F. Schulte
Rolf F. Schulte
SDSurrin S. Deen
Surrin S. Deen
FGFerdia Gallagher
Ferdia Gallagher
Hyperpolarized 13C Magnetic Resonance Imaging (13C-MRI) provides a highly sensitive tool to probe tissue metabolism in vivo and has recently been translated into clinical studies. We report the cerebral metabolism of intravenously injected hyperpolarized [1-13C]pyruvate in the brain of healthy human volunteers for the first time. Dynamic acquisition of 13C images demonstrated 13C-labeling of both lactate and bicarbonate, catalyzed by cytosolic lactate dehydrogenase and mitochondrial pyruvate dehydrogenase respectively. This demonstrates that both enzymes can be probed in vivo in the presence of an intact blood-brain barrier: the measured apparent exchange rate constant (kPL) for exchange of the hyperpolarized 13C label between [1-13C]pyruvate and the endogenous lactate pool was 0.012 ± 0.006 s-1 and the apparent rate constant (kPB) for the irreversible flux of [1-13C]pyruvate to [13C]bicarbonate was 0.002 ± 0.002 s-1. Imaging also revealed that [1-13C]pyruvate, [1-13C]lactate and [13C]bicarbonate were significantly higher in gray matter compared to white matter. Imaging normal brain metabolism with hyperpolarized [1-13C]pyruvate and subsequent quantification, have important implications for interpreting pathological cerebral metabolism in future studies.

22 July 2022 in Journal of Imaging
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AAAndronicus A. Akinyelu
Andronicus A. Akinyelu
Fulvio ZaccagnaFulvio Zaccagna
Fulvio Zaccagna
James GristJames Grist
James Grist
Mauro CastelliMauro Castelli
Mauro Castelli
Leonardo RundoLeonardo Rundo
Leonardo Rundo
Management of brain tumors is based on clinical and radiological information with presumed grade dictating treatment. Hence, a non-invasive assessment of tumor grade is of paramount importance to choose the best treatment plan. Convolutional Neural Networks (CNNs) represent one of the effective Deep Learning (DL)-based techniques that have been used for brain tumor diagnosis. However, they are unable to handle input modifications effectively. Capsule neural networks (CapsNets) are a novel type of machine learning (ML) architecture that was recently developed to address the drawbacks of CNNs. CapsNets are resistant to rotations and affine translations, which is beneficial when processing medical imaging datasets. Moreover, Vision Transformers (ViT)-based solutions have been very recently proposed to address the issue of long-range dependency in CNNs. This survey provides a comprehensive overview of brain tumor classification and segmentation techniques, with a focus on ML-based, CNN-based, CapsNet-based, and ViT-based techniques. The survey highlights the fundamental contributions of recent studies and the performance of state-of-the-art techniques. Moreover, we present an in-depth discussion of crucial issues and open challenges. We also identify some key limitations and promising future research directions. We envisage that this survey shall serve as a good springboard for further study.

1 October 2021 in Radiology
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Journal Article
Closed access
James GristJames Grist
James Grist
MCMitchell Chen
Mitchell Chen
GCGuilhem J. Collier
Guilhem J. Collier
BRBetty Raman
Betty Raman
GAGabriele Abueid
Gabriele Abueid
FGFergus Gleeson
Fergus Gleeson
At 3 months after discharge from hospitalization for COVID-19, hyperpolarized xenon 129 MRI showed abnormalities due to gas transfer limitation in the lungs in patients with dyspnea. Background SARS-CoV-2 targets angiotensin-converting enzyme 2–expressing cells in the respiratory tract. There are reports of breathlessness in patients many months after infection. Purpose To dete...

1 December 2019 in Biochimica et Biophysica Acta (BBA) - Reviews on Cancer
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Journal Article
Closed access
TLTheresa K. Leslie
Theresa K. Leslie
AJAndrew James
Andrew James
Fulvio ZaccagnaFulvio Zaccagna
Fulvio Zaccagna
James GristJames Grist
James Grist
SDSurrin Deen
Surrin Deen
William J BrackenburyWilliam J Brackenbury
William J Brackenbury