Sofija Božinović

Dr. Sofija Božinović

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Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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29 May 2021 in Remote Sensing
Verified
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AAAlper Adak
Alper Adak
SMSeth Murray
Seth Murray
SBSofija Božinović
Sofija Božinović
RLRegan Lindsey
Regan Lindsey
SNShakirah Nakasagga
Shakirah Nakasagga
SWScott Wilde
Scott Wilde
Unoccupied aerial system (UAS; i.e., drone equipped with sensors) field-based high-throughput phenotyping (HTP) platforms are used to collect high quality images of plant nurseries to screen genetic materials (e.g., hybrids and inbreds) throughout plant growth at relatively low cost. In this study, a set of 100 advanced breeding maize (Zea mays L.) hybrids were planted at optimal (OHOT trial) and delayed planting dates (DHOT trial). Twelve UAS surveys were conducted over the trials throughout the growing season. Fifteen vegetative indices (VIs) and the 99th percentile canopy height measurement (CHMs) were extracted from processed UAS imagery (orthomosaics and point clouds) which were used to predict plot-level grain yield, days to anthesis (DTA), and silking (DTS). A novel statistical approach utilizing a nested design was fit to predict temporal best linear unbiased predictors (TBLUP) for the combined temporal UAS data. Our results demonstrated machine learning-based regressions (ridge, lasso, and elastic net) had from 4- to 9-fold increases in the prediction accuracies and from 13- to 73-fold reductions in root mean squared error (RMSE) compared to classical linear regression in prediction of grain yield or flowering time. Ridge regression performed best in predicting grain yield (prediction accuracy = ~0.6), while lasso and elastic net regressions performed best in predicting DTA and DTS (prediction accuracy = ~0.8) consistently in both trials. We demonstrated that predictor variable importance descended towards the terminal stages of growth, signifying the importance of phenotype collection beyond classical terminal growth stages. This study is among the first to demonstrate an ability to predict yield in elite hybrid maize breeding trials using temporal UAS image-based phenotypes and supports the potential benefit of phenomic selection approaches in estimating breeding values before harvest.

1 June 2015 in Chilean journal of agricultural research
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SBSofija Božinović
Sofija Božinović
SPSlaven Prodanovic
Slaven Prodanovic
JVJelena Vancetovic
Jelena Vancetovic
ANAna Nikolic
Ana Nikolic
DRDanijela Ristic
Danijela Ristic
DIDragana Ignjatovic
Dragana Ignjatovic
Plus-hybrid effect refere to a combined effect of cytoplasmic male sterility (CMS) and xenia in maize (Zea mays L.) It could be used in commercial production by growing a mixture of 80% CMS hybrid and 20% of another fertile hybrid. The aim of this research was to examine individual and combined CMS and xenia effects on two hybrids widely grown in Serbia. Sterile and fertile versions of ZP 1 and ZP 2 hybrids (three-way; Iodent x Lancaster dents) were used as females, while ZP 1, ZP 2, ZP 3, ZP 4, and ZP 5 (three-way or single cross; Iodent (BSSS) x Lancaster dents) were used as pollinators. All of them belong to medium maturity group. The trial was set up at one location in Serbia (Zemun Polje) in 2009, 2010, and 2011. Molecular analysis of the five genotypes was done using simple sequence repeat (SSR) primers. Plus-hybrid effect on grain yield ranged from -6.2% to 6.2%; on thousand kernel weight from -1.7% to 5.2%; on number of kernels per area from -1.0% to 8.0%. The poor response could be due to a use of three-way instead of single cross hybrids in S type of sterility. Modified Rogers' distance between hybrids was in the range 0.211 to 0.378 and was not relevant for the effect, which depended mostly on the sterile hybrid genotype and the fertile hybrid pollinator ability. This approach should be more suitable for female hybrids with slightly poorer performance, already being produced on a sterile base

1 January 2009 in Genetika
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Journal Article
Open access
JVJelena Vancetovic
Jelena Vancetovic
LJLjupcho Jankuloski
Ljupcho Jankuloski
SBSofija Božinović
Sofija Božinović
DDDejan Dodig
Dejan Dodig
Sterile hybrids often outyield their fertile counterparts, especially if pollinated by a genetically unrelated pollinator. The combined effect of cms and xenia is referred to as the Plus-hybrid effect. The objective of this study was to determine the individual, as well as, combining effect of cms and xenia on the maize grain chemical composition. The percent of oil, protein and starch in the grain was also observed. Two sterile hybrids, their fertile counterparts and five fertile pollinator-hybrids were selected for the studies. The three-replicate trial set up according to the split-plot experimental design was performed at Zemun Polje in 2008. The obtained results show that the effects of cms on the oil percent was not significant in the studied hybrid ZP 341, while it increased at the significance level of P = 0.1 in the second observed hybrid ZP 360. The effect of this factor on the protein and starch percent was also significant (P = 0.01) in some hybrid combinations. Xenia effects on all three chemical parameters were significant (P = 0.01) in some hybrid combinations. The gained results indicate that the identification of a good combination of two hybrids, in which one would be a sterile female component, and the other a pollinator, would end up not only in the increased yield, but also in the improved maize grain quality.