Rita Graceffa

Dr. Rita Graceffa


Research Focus & Metrics

Academic Career Length

19Years (2008-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
1 October 2013 in Journal of Synchrotron Radiation
Verified
Journal Article
Open access
PDF file
RGRita Graceffa
Rita Graceffa
RNR. Paul Nobrega
R. Paul Nobrega
RBRaul A. Barrea
Raul A. Barrea
SKSagar V. Kathuria
Sagar V. Kathuria
SCSrinivas Chakravarthy
Srinivas Chakravarthy
TIThomas C. Irving
Thomas C. Irving
Small-angle X-ray scattering (SAXS) is a well established technique to probe the nanoscale structure and interactions in soft matter. It allows one to study the structure of native particles in near physiological environments and to analyze structural changes in response to variations in external conditions. The combination of microfluidics and SAXS provides a powerful tool to investigate dynamic processes on a molecular level with sub-millisecond time resolution. Reaction kinetics in the sub-millisecond time range has been achieved using continuous-flow mixers manufactured using micromachining techniques. The time resolution of these devices has previously been limited, in part, by the X-ray beam sizes delivered by typical SAXS beamlines. These limitations can be overcome using optics to focus X-rays to the micrometer size range providing that beam divergence and photon flux suitable for performing SAXS experiments can be maintained. Such micro-SAXS in combination with microfluidic devices would be an attractive probe for time-resolved studies. Here, the development of a high-duty-cycle scanning microsecond-time-resolution SAXS capability, built around the Kirkpatrick-Baez mirror-based microbeam system at the Biophysics Collaborative Access Team (BioCAT) beamline 18ID at the Advanced Photon Source, Argonne National Laboratory, is reported. A detailed description of the microbeam small-angle-scattering instrument, the turbulent flow mixer, as well as the data acquisition and control and analysis software is provided. Results are presented where this apparatus was used to study the folding of cytochrome c. Future prospects for this technique are discussed.

25 March 2011 in Biopolymers
Verified
Journal Article
Open access
PDF file
SKSagar V. Kathuria
Sagar V. Kathuria
LGLiang Guo
Liang Guo
RGRita Graceffa
Rita Graceffa
RBRaul Barrea
Raul Barrea
RNR. Paul Nobrega
R. Paul Nobrega
OBOsman Bilsel
Osman Bilsel
Small‐angle X‐ray scattering (SAXS) is a powerful method for obtaining quantitative structural information on the size and shape of proteins, and it is increasingly used in kinetic studies of folding and association reactions. In this minireview, we discuss recent developments in using SAXS to obtain structural information on the unfolded ensemble and early folding intermediates of proteins using continuous‐flow mixing devices. Interfacing of these micromachined devices to SAXS beamlines has allowed access to the microsecond time regime. The experimental constraints in implementation of turbulence and laminar flow‐based mixers with SAXS detection and a comparison of the two approaches are presented. Current improvements and future prospects of microsecond time‐resolved SAXS and the synergy with ab initio structure prediction and molecular dynamics simulations are discussed. © 2011 Wiley Periodicals, Inc. Biopolymers 95: 550–558, 2011.

1 May 2014 in Journal of Molecular Biology
Verified
Journal Article
Closed access
SKSagar V. Kathuria
Sagar V. Kathuria
CKCan Kayatekin
Can Kayatekin
RBRaul Barrea
Raul Barrea
EKElena Kondrashkina
Elena Kondrashkina
RGRita Graceffa
Rita Graceffa
OBOsman Bilsel
Osman Bilsel

26 February 2016 in ACS Nano
Verified
Journal Article
Closed access
CHClément Y. J. Hémonnot
Clément Y. J. Hémonnot
JRJuliane Reinhardt
Juliane Reinhardt
OSOliva Saldanha
Oliva Saldanha
JPJens Patommel
Jens Patommel
RGRita Graceffa
Rita Graceffa
SKSarah Köster
Sarah Köster

22 February 2019 in Journal of Synchrotron Radiation
Verified
Journal Article
Open access
PDF file
JSJoachim Schulz
Joachim Schulz
JBJ. Bielecki
J. Bielecki
RDR. B. Doak
R. B. Doak
KDK. Dörner
K. Dörner
RGRita Graceffa
Rita Graceffa
AMAdrian Mancuso
Adrian Mancuso
The SPB/SFX instrument of the European XFEL provides unique possibilities for high-throughput serial femtosecond crystallography. This publication presents the liquid-jet sample delivery setup of this instrument. The setup is compatible with state-of-the-art gas dynamic virtual nozzle systems as well as high-viscosity extruders and provides space and flexibility for other liquid injection devices and future upgrades. The liquid jets are confined in a differentially pumped catcher assembly and can be replaced within a couple of minutes through a load-lock. A two-microscope imaging system allows visual control of the jets from two perspectives.

19 July 2013 in Biopolymers
Verified
Journal Article
Closed access
PDF file
SKSagar V. Kathuria
Sagar V. Kathuria
ACAlexander Chan
Alexander Chan
RGRita Graceffa
Rita Graceffa
RNR. Paul Nobrega
R. Paul Nobrega
CMC. Robert Matthews
C. Robert Matthews
OBOsman Bilsel
Osman Bilsel