Kumaradevan Punithakumar

Dr. Kumaradevan Punithakumar

orcid

Research Focus & Metrics

Academic Career Length

24Years (2003-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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17 June 2021 in IEEE Transactions on Medical Imaging
Verified
Journal Article
Open access
VCVíctor Manuel Campello
Víctor Manuel Campello
PGPolyxeni Gkontra
Polyxeni Gkontra
CICristian Izquierdo
Cristian Izquierdo
CMCarlos Martin-Isla
Carlos Martin-Isla
ASAlireza Sojoudi
Alireza Sojoudi
KLKarim Lekadir
Karim Lekadir
The emergence of deep learning has considerably advanced the state-of-the-art in cardiac magnetic resonance (CMR) segmentation. Many techniques have been proposed over the last few years, bringing the accuracy of automated segmentation close to human performance. However, these models have been all too often trained and validated using cardiac imaging samples from single clinical centres or homogeneous imaging protocols. This has prevented the development and validation of models that are generalizable across different clinical centres, imaging conditions or scanner vendors. To promote further research and scientific benchmarking in the field of generalizable deep learning for cardiac segmentation, this paper presents the results of the Multi-Centre, Multi-Vendor and Multi-Disease Cardiac Segmentation (M&Ms) Challenge, which was recently organized as part of the MICCAI 2020 Conference. A total of 14 teams submitted different solutions to the problem, combining various baseline models, data augmentation strategies, and domain adaptation techniques. The obtained results indicate the importance of intensity-driven data augmentation, as well as the need for further research to improve generalizability towards unseen scanner vendors or new imaging protocols. Furthermore, we present a new resource of 375 heterogeneous CMR datasets acquired by using four different scanner vendors in six hospitals and three different countries (Spain, Canada and Germany), which we provide as open-access for the community to enable future research in the field.

7 April 2020 in IEEE Transactions on Medical Imaging
Verified
Journal Article
Closed access
JBJiri Borovec
Jiri Borovec
JKJan Kybic
Jan Kybic
IAIgnacio Arganda-Carreras
Ignacio Arganda-Carreras
DSDmitry V. Sorokin
Dmitry V. Sorokin
Gloria  BuenoGloria Bueno
Gloria Bueno
AMArrate Muñoz-Barrutia
Arrate Muñoz-Barrutia
Automatic Non-rigid Histological Image Registration (ANHIR) challenge was organized to compare the performance of image registration algorithms on several kinds of microscopy histology images in a fair and independent manner. We have assembled 8 datasets, containing 355 images with 18 different stains, resulting in 481 image pairs to be registered. Registration accuracy was evaluated using manually placed landmarks. In total, 256 teams registered for the challenge, 10 submitted the results, and 6 participated in the workshop. Here, we present the results of 7 well-performing methods from the challenge together with 6 well-known existing methods. The best methods used coarse but robust initial alignment, followed by non-rigid registration, used multiresolution, and were carefully tuned for the data at hand. They outperformed off-the-shelf methods, mostly by being more robust. The best methods could successfully register over 98% of all landmarks and their mean landmark registration accuracy (TRE) was 0.44% of the image diagonal. The challenge remains open to submissions and all images are available for download.

12 May 2008 in IEEE Transactions on Aerospace and Electronic Systems
Verified
Journal Article
Closed access
KPKumaradevan Punithakumar
Kumaradevan Punithakumar
TKT. Kirubarajan
T. Kirubarajan
ASA. Sinha
A. Sinha
Tracking multiple targets with uncertain target dynamics is a difficult problem, especially with nonlinear state and/or measurement equations. With multiple targets, representing the full posterior distribution over target states is not practical. The problem becomes even more complicated when the number of targets varies, in which case the dimensionality of the state space itself becomes a discrete random variable. The probability hypothesis density (PHD) filter, which propagates only the first-order statistical moment (the PHD) of the full target posterior, has been shown to be a computationally efficient solution to multitarget tracking problems with a varying number of targets. The integral of PHD in any region of the state space gives the expected number of targets in that region. With maneuvering targets, detecting and tracking the changes in the target motion model also become important. The target dynamic model uncertainty can be resolved by assuming multiple models for possible motion modes and then combining the mode-dependent estimates in a manner similar to the one used in the interacting multiple model (IMM) estimator. This paper propose a multiple-model implementation of the PHD filter, which approximates the PHD by a set of weighted random samples propagated over time using sequential Monte Carlo (SMC) methods. The resulting filter can handle nonlinear, non-Gaussian dynamics with uncertain model parameters in multisensor-multitarget tracking scenarios. Simulation results are presented to show the effectiveness of the proposed filter over single-model PHD filters.

1 July 2020 in Computers in Biology and Medicine
Verified
Journal Article
Closed access
FAFatemeh Abdolali
Fatemeh Abdolali
JKJeevesh Kapur
Jeevesh Kapur
JJJacob Lester Jaremko
Jacob Lester Jaremko
MNMichelle Noga
Michelle Noga
AHAbhilash Rakkunedeth Hareendranathan
Abhilash Rakkunedeth Hareendranathan
KPKumaradevan Punithakumar
Kumaradevan Punithakumar

17 April 2023 in IEEE Journal of Biomedical and Health Informatics
Verified
Journal Article
Closed access
CMCarlos Martín-Isla
Carlos Martín-Isla
VCVíctor Manuel Campello
Víctor Manuel Campello
CICristian Izquierdo
Cristian Izquierdo
KKKaisar Kushibar
Kaisar Kushibar
CSCarla Sendra-Balcells
Carla Sendra-Balcells
KLKarim Lekadir
Karim Lekadir
In recent years, several deep learning models have been proposed to accurately quantify and diagnose cardiac pathologies. These automated tools heavily rely on the accurate segmentation of cardiac structures in MRI images. However, segmentation of the right ventricle is challenging due to its highly complex shape and ill-defined borders. Hence, there is a need for new methods to handle such structure's geometrical and textural complexities, notably in the presence of pathologies such as Dilated Right Ventricle, Tricuspid Regurgitation, Arrhythmogenesis, Tetralogy of Fallot, and Inter-atrial Communication. The last MICCAI challenge on right ventricle segmentation was held in 2012 and included only 48 cases from a single clinical center. As part of the 12 th Workshop on Statistical Atlases and Computational Models of the Heart (STACOM 2021), the M&Ms-2 challenge was organized to promote the interest of the research community around right ventricle segmentation in multi-disease, multi-view, and multi-center cardiac MRI. Three hundred sixty CMR cases, including short-axis and long-axis 4-chamber views, were collected from three Spanish hospitals using nine different scanners from three different vendors, and included a diverse set of right and left ventricle pathologies. The solutions provided by the participants show that nnU-Net achieved the best results overall. However, multi-view approaches were able to capture additional information, highlighting the need to integrate multiple cardiac diseases, views, scanners, and acquisition protocols to produce reliable automatic cardiac segmentation algorithms.

4 April 2023 in Medical Image Analysis
Verified
Journal Article
Closed access
LLLei Li
Lei Li
FWFuping Wu
Fuping Wu
SWSihan Wang
Sihan Wang
Xinzhe LuoXinzhe Luo
Xinzhe Luo
CMCarlos Martín-Isla
Carlos Martín-Isla
Xiahai ZhuangXiahai Zhuang
Xiahai Zhuang