Shabarni Gaffar

Dr. Shabarni Gaffar

Universitas Padjadjaran
orcid

Research Focus & Metrics

Academic Career Length

26Years (2001-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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3 August 2019 in Food Analytical Methods
Verified
Journal Article
Open access
PDF file
YHYeni Wahyuni Hartati
Yeni Wahyuni Hartati
ASAnis Amiliya Suryani
Anis Amiliya Suryani
MAMila Agustina
Mila Agustina
SGShabarni Gaffar
Shabarni Gaffar
AAAnni Anggraeni
Anni Anggraeni
The presence of pork content in food products can be a serious issue over an adulteration of food, particularly for consumers who pay attention to halal certification or other religious beliefs concerning the consumption of pork. Due to this fact, finding a method for the detection of pork content in food products that is sensitive, fast, and accurate is of interest. In this study, an electrochemical DNA biosensor with gold nanoparticle–DNA probe bioconjugates was developed to detect Sus scrofa mitochondrial DNA (mtDNA) using a gold-modified screen-printed carbon electrode (SPCE-Gold). The bioconjugates were formed by attaching the DNA probe with gold nanoparticles (AuNPs). Detection was carried out based on the optimum conditions resulting from the Box–Behnken experimental design that were 40 μL of 153 μg/mL bioconjugates; bioconjugate immobilization time, 20 min; and DNA hybridization time, 60 min. The hybridization of target synthetic DNA to the DNA probe was characterized by voltammetry based on the methylene blue indicator signal at a potential of about − 0.35 V. The results showed that the detection limit was 0.58 μg/mL and the recovery was 101.74%. mtDNA samples from various raw and processed meat were isolated and cut with restriction enzyme Sal1. Hybridization of mtDNA samples to the gold nanoparticle–DNA probe bioconjugates anchored to the SPCE-Gold surface was characterized based on the current response generated by methylene blue as an indicator. The result shows that there is an increasing trend in the response of raw and processed meat samples containing pork DNA. The development of an electrochemical DNA biosensor, based on gold nanoparticle–DNA probe bioconjugates, has not been reported previously. This biosensor is selective towards 10% of the pork DNA content in the mixture. Therefore, this biosensor method can be used as an alternative method to distinguish samples containing pork, according to the detection limit.

24 February 2022 in Journal of Electrochemical Science and Engineering
Verified
Journal Article
Open access
PDF file
ASArum Kurnia Sari
Arum Kurnia Sari
YHYeni Wahyuni Hartati
Yeni Wahyuni Hartati
SGShabarni Gaffar
Shabarni Gaffar
IAIsa Anshori
Isa Anshori
DHDarmawan Hidayat
Darmawan Hidayat
HWhesti lina wiraswati
hesti lina wiraswati
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is the virus identified as the cause of the Coronavirus Disease 2019 (COVID-19) outbreak. The gold standard for detecting this virus is polymerase chain reaction (PCR). The electrochemical biosensor method can be an alternative method for detecting several biomolecules, such as viruses, because it is proven to have several advantages, including portability, good sensitivity, high specificity, fast response, and ease of use. This study aims to optimize an electro­chemical aptasensor using an AuNP-modified screen-printed carbon electrode (SPCE) with an aptamer to detect RBD protein S SARS-CoV-2. Aptasensors with the streptavidin-biotin system were immobilized on the SPCE/AuNP surface via covalent bonding with linkers to 3-mercaptopropionic acid (MPA) and electrochemically characterized by the [Fe(CN)6]3-/4- redox system using differential pulse voltammetry. The results showed that the immobi­lized aptamer on the SPCE/AuNP electrode surface experienced a decrease in current from 11.388 to 4.623 µA. The experimental conditions were optimized using the Box-Behnken experimental design for the three factors that affect the current response. The results of the optimization of the three parameters are the concentration of aptamer, incubation time of aptamer, and incubation time of RBD protein S SARS-CoV-2, each of which is 0.5 µg/mL, 40 minutes, and 60 minutes, respectively. The RBD protein S SARS-CoV-2 with various concentrations was tested on an electrochemical aptasensor to determine the de­tection limit and quantification limit, and the respective results were 2.63 and 7.97 ng/mL. The electrochemical aptasensor that has been developed in this study can be applied to detect RBD protein S SARS-CoV-2 as a COVID-19 biomarker in a simple, practical, and sensitive way.

6 December 2023 in Biomolecules
Verified
Journal Article
Open access
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SGShabarni Gaffar
Shabarni Gaffar
AAA Sayyidatina Aathirah
A Sayyidatina Aathirah
Fatty-acid-binding proteins (FABPs) serve a crucial role in the metabolism and transport of fatty acids and other hydrophobic ligands as an intracellular protein family. They are also recognized as a critical mediator in the inflammatory and ischemic pathways. FABPs are found in a wide range of tissues and organs, allowing them to contribute to various disease/injury developments that have not been widely discussed. We have collected and analyzed research journals that have investigated the role of FABPs in various diseases. Through this review, we discuss the findings on the potential of FABPs as biomarkers for various diseases in different tissues and organs, looking at their expression levels and their roles in related diseases according to available literature data. FABPs have been reported to show significantly increased expression levels in various tissues and organs associated with metabolic and inflammatory diseases. Therefore, FABPs are a promising novel biomarker that needs further development to optimize disease diagnosis and prognosis methods along with previously discovered markers.

6 September 2024 in Phytomedicine Plus
Verified
Journal Article
Open access
OTOpik Taupiqurrohman
Opik Taupiqurrohman
LHLathifah Puji Hastuti
Lathifah Puji Hastuti
DODina Oktavia
Dina Oktavia
BABelal Omar Al-Najjar
Belal Omar Al-Najjar
MYMuhammad Yusuf
Muhammad Yusuf
SGShabarni Gaffar
Shabarni Gaffar

17 February 2021 in Royal Society Open Science
Verified
Journal Article
Open access
YHYeni Wahyuni Hartati
Yeni Wahyuni Hartati
DKDina Ratna Komala
Dina Ratna Komala
DHDiana Hendrati
Diana Hendrati
SGShabarni Gaffar
Shabarni Gaffar
Ari HardiantoAri Hardianto
Ari Hardianto
HBHusein Hernandi Bahti
Husein Hernandi Bahti
Epithelial sodium channel (ENaC) is a transmembrane protein that has an essential role in maintaining the levels of sodium in blood plasma. A person with a family history of hypertension has a high enough amount of ENaC protein in the kidneys or other organs, so that the ENaC protein acts as a marker that a person is susceptible to hypertension. An aptasensor involves aptamers, which are oligonucleotides that function similar to antibodies, as sensing elements. An electrochemical aptasensor for the detection of ENaC was developed using a screen-printed carbon electrode (SPCE) which was modified by electrodeposition of cerium oxide (CeO 2 ). The aptamer immobilization was via the streptavidin–biotin system. The measurement of changes in current of the active redox [Fe(CN) 6 ] 3−/4− was carried out by differential pulse voltammetry. The surfaces of SPCE and SPCE/CeO 2 were characterized using scanning electron microscopy, voltammetry and electrochemical impedance spectroscopy. The Box–Behnken experimental optimization design revealed the streptavidin incubation time, aptamer incubation time and streptavidin concentrations were 30 min, 30 min and 10.8 µg ml −1 , respectively. Various concentrations of ENaC were used to obtain the linearity range of 0.05–3.0 ng ml −1 , and the limits of detection and quantification were 0.012 ng ml −1 and 0.038 ng ml −1 , respectively. This aptasensor method has the potential to measure the ENaC protein levels in urine samples as well as to be a point-of-care device.

5 April 2024 in ACS Applied Bio Materials
Verified
Journal Article
Closed access
SZSalma Nur Zakiyyah
Salma Nur Zakiyyah
IIIrkham Irkham
Irkham Irkham
YEYasuaki Einaga
Yasuaki Einaga
NGNoto Susanto Gultom
Noto Susanto Gultom
RFRetna Putri Fauzia
Retna Putri Fauzia
YHYeni Wahyuni Hartati
Yeni Wahyuni Hartati