Background: The mechanism of iron (Fe) uptake in plants has been extensively characterized, but little is known about how Fe transport to different subcellular compartments affects Fe localization in rice seed. Here, we discuss the characterization of a rice vacuolar Fe transporter 2 (OsVIT2) T-DNA insertion line (osvit2) and report that the knockdown of OsVIT2 and mitochondrial Fe transporter (MIT) expression affects seed Fe localization. Findings: osvit2 plants accumulated less Fe in their shoots when grown under normal or excess Fe conditions, while the accumulation of Fe was comparable to that in wild-type (WT) plants under Fe-deficient conditions. The accumulation of zinc, copper, and manganese also changed significantly in the shoots of osvit2 plants. The growth of osvit2 plants was also slow compared to that of WT plants. The concentration of Fe increased in osvit2 polished seeds. Previously, we reported that the expression of OsVIT2 was higher in MIT knockdown (mit-2) plants, and in this study, the accumulation of Fe in mit-2 seeds decreased significantly. Conclusions: These results suggest that vacuolar Fe trafficking is important for plant Fe homeostasis and distribution, especially in plants grown in the presence of excess Fe. Moreover, changes in the expression of OsVIT2 and MIT affect the concentration and localization of metals in brown rice as well as in polished rice seeds.

Cadmium (Cd) is a toxic heavy metal that causes severe health issues in humans. Cd accumulates in the human body when foods produced in Cd-contaminated fields are eaten. Therefore, soil remediation of contaminated fields is necessary to provide safe foods. Rice is one of the primary candidates for phytoremediation. There is a genotypic variation of Cd concentration in the shoots and grains of rice. Using the world rice core collection, ‘Jarjan’, ‘Anjana Dhan’, and ‘Cho-ko-koku’ were observed with a significantly higher level of Cd accumulation in the shoots and grains. Moreover, OsHMA3, a heavy metal transporter, was identified as a responsive gene of quantitative trait locus (QTL) for high Cd concentration in the shoots of these three varieties likewise. However, it is difficult to apply practical phytoremediation to these varieties because of their unfavorable agricultural traits, such as shatter and easily lodged. New rice varieties and lines were bred for Cd phytoremediation using OsHMA3 as a DNA marker selection. All of them accumulated Cd in the shoots equal to or higher than ‘Cho-ko-koku’ with improved cultivation traits. Therefore, they can be used for practical Cd phytoremediation.

Cadmium (Cd) is a heavy metal that is toxic to humans, and the accumulation of Cd in rice (Oryza sativa L.) grains is a widespread problem in rice agriculture. Phytoremediation is one of the most effective methods for reducing soil Cd levels in paddy fields, and rice is a promising candidate for phytoremediation. In this study, we developed the rice line “Akita 110” for use in Cd phytoremediation, particularly in Akita Prefecture, Japan. “Akita 110” was derived from a cross between “Cho-ko-koku” and “Akita 63.” Compared to “Akitakomachi,” which is the leading cultivar in Akita Prefecture, Japan, “Akita 110” exhibited a heading date and maturing date that were 16 and 15 d later, respectively. The culm length of “Akita 110” was remarkably shorter than that of “Cho-ko-koku”, and “Akita 110” exhibited improved lodging resistance. The shoot dry weight of “Akita 110” was larger than that of “Cho-ko-koku.” “Akita 110” exhibited a non-shattering phenotype. The Cd extraction of “Akita 110” was equivalent to that of “Cho-ko-koku.” The average of Cd extraction using “Akita 110” in five different Cd-contaminated fields was 20.1 mg m⁻², whereas that using “Cho-ko-koku” was 24.3 mg m⁻². In a large-scale field trial, Cd levels in shoots of “Akita 110” were equivalent to those of “Cho-ko-koku”. One year from initial planting, soil Cd concentrations in plots remediated with “Akita 110” reduced by 15.5%, whereas remediation with “Cho-ko-koku” reduced soil Cd levels by 10.1%. The “Akita 110” developed here exhibits improved cultivation traits compared to the “Cho-ko-koku,” with comparable Cd extraction performance. Thus, “Akita 110” is a promising candidate for Cd phytoremediation in northern parts of Japan.

Phytoextraction by high-Cd-accumulating rice lacking a functional OsHMA3 allele is promising for Cd removal from paddy soils. To increase rice Cd extraction efficiency, we developed a new high-Cd variety, TJN25-11. For this, we pyramided a nonfunctional OsHMA3 allele from a high-Cd variety, Jarjan, and two QTLs for increased shoot Cd concentrations, which were discovered in a mapping population derived from a high-Cd variety, Nepal 555, and a low-Cd variety, Tachisugata. In two Cd-contaminated paddy fields under drained aerobic soil conditions, TJN25-11 presented significantly higher Cd concentrations in the straw and panicles than the OsHMA3-deficient varieties TJTT8 and Cho-ko-koku. Among the varieties, TJN25-11 had a relatively high shoot biomass, resulting in the highest Cd accumulation in the shoots. The soil Cd decreased by approximately 20% after TJN25-11 growth. The amount of Cd that accumulated in the TJN25-11 aerial parts was much greater than the amount of Cd that decreased in the topsoil, suggesting that Cd was absorbed from deeper soil layers. Thus, we revealed the effects of QTL pyramiding on shoot Cd accumulation and Cd phytoextraction efficiency. Since TJN25-11 has favorable agronomic traits for compatibility with Japanese cultivation systems, this variety could be useful for Cd phytoextraction in Cd-contaminated paddy fields.

Cadmium (Cd) is a toxic heavy metal that is mainly accumulated through the consumption of foods produced in Cd-contaminated fields. Phytoremediation is one of the most effective methods to reduce the soil Cd concentration. In this study, we bred a new rice line, ‘Akita 119’, for Cd phytoremediation. ‘Akita 119’ was obtained by a soft X-ray mutation of ‘Cho-ko-koku’, a naturally high-Cd-accumulating rice cultivar. The heading date of ‘Akita 119’ was about 2 weeks later than that of ‘Akitakomachi’, which is the leading cultivar in Akita Prefecture, Japan. ‘Akita 119’ has a short culm length and many panicles. The shattering resistance and lodging resistance of ‘Akita 119’ were improved compared to ‘Cho-ko-koku’. The thousand-grain weight of ‘Akita 119’ was much smaller than that of ‘Akitakomachi’, and grains of ‘Akita 119’ could be easily distinguished from general japonica cultivars. When ‘Akita 119’ was grown in Cd-contaminated fields, the shoot dry weight and Cd concentration were similar to those of ‘Cho-ko-koku’. These results demonstrate that ‘Akita 119’ has improved agronomic characteristics compared to ‘Cho-ko-koku’ while retaining the ability to extract Cd. Therefore, it should be considered a promising candidate for Cd phytoremediation in paddy fields in northern parts of Japan.