André Dekker

André Dekker

orcid

Research Focus & Metrics

Academic Career Length

29Years (1998-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 March 2012 in European Journal of Cancer
Verified
Journal Article
Closed access
PLPhilippe Lambin
Philippe Lambin
EREmmanuel Rios-Velazquez
Emmanuel Rios-Velazquez
RLRalph Leijenaar
Ralph Leijenaar
SCSara Carvalho
Sara Carvalho
RSRuud G.P.M. van Stiphout
Ruud G.P.M. van Stiphout
HAHugo J.W.L. Aerts
Hugo J.W.L. Aerts

3 June 2014 in Nature Communications
Verified
Journal Article
Open access
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HAHugo J. W. L. Aerts
Hugo J. W. L. Aerts
EVEmmanuel Rios Velazquez
Emmanuel Rios Velazquez
RLRalph T. H. Leijenaar
Ralph T. H. Leijenaar
CPChintan Parmar
Chintan Parmar
PGPatrick Grossmann
Patrick Grossmann
Philippe LambinPhilippe Lambin
Philippe Lambin
Human cancers exhibit strong phenotypic differences that can be visualized noninvasively by medical imaging. Radiomics refers to the comprehensive quantification of tumour phenotypes by applying a large number of quantitative image features. Here we present a radiomic analysis of 440 features quantifying tumour image intensity, shape and texture, which are extracted from computed tomography data of 1,019 patients with lung or head-and-neck cancer. We find that a large number of radiomic features have prognostic power in independent data sets of lung and head-and-neck cancer patients, many of which were not identified as significant before. Radiogenomics analysis reveals that a prognostic radiomic signature, capturing intratumour heterogeneity, is associated with underlying gene-expression patterns. These data suggest that radiomics identifies a general prognostic phenotype existing in both lung and head-and-neck cancer. This may have a clinical impact as imaging is routinely used in clinical practice, providing an unprecedented opportunity to improve decision-support in cancer treatment at low cost.

1 November 2012 in Magnetic Resonance Imaging
Verified
Journal Article
Closed access
VKVirendra Kumar
Virendra Kumar
YGYuhua Gu
Yuhua Gu
SBSatrajit Basu
Satrajit Basu
ABAnders Berglund
Anders Berglund
SESteven A. Eschrich
Steven A. Eschrich
RGRobert Gillies
Robert Gillies

1 November 2018 in International Journal of Radiation Oncology, Biology, Physics
Verified
Journal Article
Open access
ATAlberto Traverso
Alberto Traverso
LWLeonard Wee
Leonard Wee
ADAndré Dekker
André Dekker
RGRobert Gillies
Robert Gillies
An ever-growing number of predictive models used to inform clinical decision making have included quantitative, computer-extracted imaging biomarkers, or "radiomic features." Broadly generalizable validity of radiomics-assisted models may be impeded by concerns about reproducibility. We offer a qualitative synthesis of 41 studies that specifically investigated the repeatability and reproducibility of radiomic features, derived from a systematic review of published peer-reviewed literature. The PubMed electronic database was searched using combinations of the broad Haynes and Ingui filters along with a set of text words specific to cancer, radiomics (including texture analyses), reproducibility, and repeatability. This review has been reported in compliance with Preferred Reporting Items for Systematic Reviews and Meta-Analyses guidelines. From each full-text article, information was extracted regarding cancer type, class of radiomic feature examined, reporting quality of key processing steps, and statistical metric used to segregate stable features. Among 624 unique records, 41 full-text articles were subjected to review. The studies primarily addressed non-small cell lung cancer and oropharyngeal cancer. Only 7 studies addressed in detail every methodologic aspect related to image acquisition, preprocessing, and feature extraction. The repeatability and reproducibility of radiomic features are sensitive at various degrees to processing details such as image acquisition settings, image reconstruction algorithm, digital image preprocessing, and software used to extract radiomic features. First-order features were overall more reproducible than shape metrics and textural features. Entropy was consistently reported as one of the most stable first-order features. There was no emergent consensus regarding either shape metrics or textural features; however, coarseness and contrast appeared among the least reproducible. Investigations of feature repeatability and reproducibility are currently limited to a small number of cancer types. Reporting quality could be improved regarding details of feature extraction software, digital image manipulation (preprocessing), and the cutoff value used to distinguish stable features.

29 August 2013 in Acta Oncologica
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Journal Article
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RLRalph T. H. Leijenaar
Ralph T. H. Leijenaar
SCSara Carvalho
Sara Carvalho
EVEmmanuel Rios Velazquez
Emmanuel Rios Velazquez
WEWouter J. C. van Elmpt
Wouter J. C. van Elmpt
CPChintan Parmar
Chintan Parmar
Philippe LambinPhilippe Lambin
Philippe Lambin
Purpose. Besides basic measurements as maximum standardized uptake value (SUV)max or SUVmean derived from 18F-FDG positron emission tomography (PET) scans, more advanced quantitative imaging features (i.e. “Radiomics” features) are increasingly investigated for treatment monitoring, outcome prediction, or as potential biomarkers. With these prospected applications of Radiomics features, it is a requisite that they provide robust and reliable measurements. The aim of our study was therefore to perform an integrated stability analysis of a large number of PET-derived features in non-small cell lung carcinoma (NSCLC), based on both a test-retest and an inter-observer setup. Methods. Eleven NSCLC patients were included in the test-retest cohort. Patients underwent repeated PET imaging within a one day interval, before any treatment was delivered. Lesions were delineated by applying a threshold of 50% of the maximum uptake value within the tumor. Twenty-three NSCLC patients were included in the inter-observer cohort. Patients underwent a diagnostic whole body PET-computed tomography (CT). Lesions were manually delineated based on fused PET-CT, using a standardized clinical delineation protocol. Delineation was performed independently by five observers, blinded to each other. Fifteen first order statistics, 39 descriptors of intensity volume histograms, eight geometric features and 44 textural features were extracted. For every feature, test-retest and inter-observer stability was assessed with the intra-class correlation coefficient (ICC) and the coefficient of variability, normalized to mean and range. Similarity between test-retest and inter-observer stability rankings of features was assessed with Spearman's rank correlation coefficient. Results. Results showed that the majority of assessed features had both a high test-retest (71%) and inter-observer (91%) stability in terms of their ICC. Overall, features more stable in repeated PET imaging were also found to be more robust against inter-observer variability. Conclusion. Results suggest that further research of quantitative imaging features is warranted with respect to more advanced applications of PET imaging as being used for treatment monitoring, outcome prediction or imaging biomarkers.

20 November 2012 in Nature Reviews Clinical Oncology
Verified
Journal Article
Closed access
PDF file
PLPhilippe Lambin
Philippe Lambin
RSRuud G. P. M. van Stiphout
Ruud G. P. M. van Stiphout
MSMaud H. W. Starmans
Maud H. W. Starmans
EREmmanuel Rios-Velazquez
Emmanuel Rios-Velazquez
GNGeorgi Nalbantov
Georgi Nalbantov
ADAndré Dekker
André Dekker