Peter Skidmore

Mr. Peter Skidmore

orcid

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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9 July 2021 in Brain Sciences
Verified
Journal Article
Open access
PDF file
PSPunnag Saha
Punnag Saha
PSPeter Skidmore
Peter Skidmore
LHLaRinda Holland
LaRinda Holland
AMAyan Mondal
Ayan Mondal
DBDipro Bose
Dipro Bose
SCSaurabh Chatterjee
Saurabh Chatterjee
Gulf War Illness (GWI) is a chronic multi-symptomatic illness that is associated with fatigue, pain, cognitive deficits, and gastrointestinal disturbances and presents a significant challenge to treat in clinics. Our previous studies show a role of an altered Gut–Brain axis pathology in disease development and symptom persistence in GWI. The present study utilizes a mouse model of GWI to study the role of a labdane diterpenoid andrographolide (AG) to attenuate the Gut–Brain axis-linked pathology. Results showed that AG treatment in mice (100 mg/kg) via oral gavage restored bacteriome alterations, significantly increased probiotic bacteria Akkermansia, Lachnospiraceae, and Bifidobacterium, the genera that are known to aid in preserving gut and immune health. AG also corrected an altered virome with significant decreases in virome families Siphoviridae and Myoviridae known to be associated with gastrointestinal pathology. AG treatment significantly restored tight junction proteins that correlated well with decreased intestinal proinflammatory mediators IL-1β and IL-6 release. AG treatment could restore Claudin-5 levels, crucial for maintaining the BBB integrity. Notably, AG could decrease microglial activation and increase neurotrophic factor BDNF, the key to neurogenesis. Mechanistically, microglial conditioned medium generated from IL-6 stimulation with or without AG in a concentration similar to circulating levels found in the GWI mouse model and co-incubated with neuronal cells in vitro, decreased Tau phosphorylation and neuronal apoptosis. In conclusion, we show that AG treatment mitigated the Gut–Brain-Axis associated pathology in GWI and may be considered as a potential therapeutic avenue for the much-needed bench to bedside strategies in GWI.

21 September 2024 in Clinical Genetics
Verified
Journal Article
Open access
MNMohammad Sadegh Shams Nosrati
Mohammad Sadegh Shams Nosrati
ADAlireza Doustmohammadi
Alireza Doustmohammadi
MSMariasavina Severino
Mariasavina Severino
FRFerruccio Romano
Ferruccio Romano
MZMahdi Zafari
Mahdi Zafari
MSMarcello Scala
Marcello Scala
Pediatric intestinal pseudo‐obstruction (PIPO) is a rare congenital disorder of the enteric nervous system with distal colon aganglionosis potentially leading to intestinal obstruction. Recently, biallelic variants in KIF26A, encoding a crucial motor protein for the migration and differentiation of enteric neural crest cells, have been associated with a neurodevelopmental condition featuring cortical defects and PIPO‐like features, though in absence of aganglionosis. So far, only 10 patients have been reported. In this study, we investigated three subjects with congenital hydrocephalus, neurodevelopmental impairment, and intestinal obstruction megacolon syndrome. Brain MRI revealed malformations within cortical dysplasia spectrum, including polymicrogyria and heterotopia. Pathology study of the intestine revealed aganglionosis and elevated acetylcholinesterase activity in parasympathetic nerve fibers. Through trio‐exome sequencing (ES), we detected four novel biallelic KIF26A variants, including two missense changes (#1) and two distinct homozygous truncating variants in (#2 and #3). All variants are rare and predicted to be deleterious according to in silico tools. To characterize the impact of the missense variants, we performed 3D protein modeling using Alphafold3 and YASARA. Mutants exhibited increased energy scores compared to wild‐type protein, supporting a significant structural destabilization of the protein. Our study expands the genotype and phenotype spectrum of the emerging KIF26A‐related disorder.

6 November 2025 in medRxiv
Verified
Preprint
Open access
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PBPritha Bisarad
Pritha Bisarad
YWYung-Chun Wang
Yung-Chun Wang
PSPeter Skidmore
Peter Skidmore
CGCarolina I. Galaz-Montoya
Carolina I. Galaz-Montoya
SLSara A. Lewis
Sara A. Lewis
HDHossein Darvish
Hossein Darvish
Cerebral palsy (CP) is a neurodevelopmental disorder of motor function, with genetic etiologies, particularly de novo variants, identified in approximately one-third of cases. The contribution of consanguinity – long-recognized as a CP risk factor – has remained undefined. Here, we report findings from 188 primarily consanguineous Middle Eastern families with CP and identified putative causative genes in nearly three-quarters. The majority demonstrated recessive inheritance, although multi-level consanguinity and multilocus pathogenic variants complicated Mendelian assortment analyses. We identified 110 known CP-associated genes – five with phenotypic expansions and three others exhibiting new recessive inheritance patterns – and 24 novel candidates. We characterized ten candidates as high-confidence based on independent replication and protein modeling. We experimentally validated a role for SUCO variants in CP and newly identified a role for mid-gestational migrating excitatory neurons in the disorder. These findings highlight new genes, pathways, and phenotypes that reveal striking genomic diversity in CP.

14 May 2021 in The FASEB Journal
Verified
Journal Article
Open access
PDF file
PSPunnag Saha
Punnag Saha
PSPeter Skidmore
Peter Skidmore
LHLaRinda Holland
LaRinda Holland
AMAyan Mondal
Ayan Mondal
DBDipro Bose
Dipro Bose
Saurabh ChatterjeeSaurabh Chatterjee
Saurabh Chatterjee
Gulf War Illness (GWI) is a chronic multi‐symptom disorder that affected almost one‐third of the deployed veterans during the first Persian Gulf War (1990‐91). Symptoms include gastrointestinal disturbances, chronic fatigue, cognitive deficiencies, and neuroinflammation. Our group has recently shown a series of different therapeutic strategies that span oral butyrate, anti‐viral drug Ribavirin, and TLR4 antagonist Sparstolonin B effectively improving outcomes to murine GWI‐linked symptoms. Andrographolide (AG), a labdane diterpenoid produced by the plant Andrographis paniculata, exerts numerous beneficial effects in various cell types. Adult C57BL/6J mice were exposed to the GWI chemicals (GWC) pyridostigmine bromide and permethrin for a week (GWT group) and simultaneously treated with AG (GWT+AG group). In our previous report, virome dysbiosis showed a strong association with GWI inflammation. Next‐Gen Sequencing data showed both virome richness and Shannon diversity were markedly altered in GWT+AG mice than GWT mice. The observed increased relative abundance of Siphoviridae, Myoviridae, and decreased Microviridae abundance in the GWT group was reversed by AG treatment, referring to a restored gut environment. Gut leaching marked by decreased Occludin expression and increased Claudin2 expression was reversed by AG treatment, a likely consequence of AG induced decrease in TLR4 and TLR7 expression. AG administration restored gut barrier integrity, decreased TLR4 activation, NFκb phosphorylation, and gut inflammation. Furthermore, systemic inflammation in GWT mice, evidenced by the high level of serum IL‐1β and IL‐6, was found to be decreased in GWT+AG mice. Blood‐brain barrier (BBB) integrity loss and resulting microglial activation, a common feature of GWI murine pathology were reversed by AG treatment. AG restored dysfunctional BBB by enhancing tight junction protein Claudin5 expression as well as decreased microglial activation. Also, AG administration led to high brain‐derived neurotrophic factor (BDNF) expression in the frontal cortex, a molecule with a pronounced role in synaptic plasticity and neuronal regeneration. In summary, these results explicitly imply that AG played a key role in decreasing GWI‐associated intestinal, systemic, and neuroinflammation whereas it also improved intestinal barrier and BBB integrity in the GWI mouse model.

24 July 2024 in Viruses
Verified
Journal Article
Open access
PDF file
TFTEMITOPE FALEYE
TEMITOPE FALEYE
PSPeter Skidmore
Peter Skidmore
AEAmir Elyaderani
Amir Elyaderani
Sangeet AdhikariSangeet Adhikari
Sangeet Adhikari
NKNicole Kaiser
Nicole Kaiser
Matthew ScotchMatthew Scotch
Matthew Scotch
The SARS-CoV-2 pandemic resulted in a scale-up of viral genomic surveillance globally. However, the wet lab constraints (economic, infrastructural, and personnel) of translating novel virus variant sequence information to meaningful immunological and structural insights that are valuable for the development of broadly acting countermeasures (especially for emerging and re-emerging viruses) remain a challenge in many resource-limited settings. Here, we describe a workflow that couples wastewater surveillance, high-throughput sequencing, phylogenetics, immuno-informatics, and virus capsid structure modeling for the genotype-to-serotype characterization of uncultivated picornavirus sequences identified in wastewater. Specifically, we analyzed canine picornaviruses (CanPVs), which are uncultivated and yet-to-be-assigned members of the family Picornaviridae that cause systemic infections in canines. We analyzed 118 archived (stored at −20 °C) wastewater (WW) samples representing a population of ~700,000 persons in southwest USA between October 2019 to March 2020 and October 2020 to March 2021. Samples were pooled into 12 two-liter volumes by month, partitioned (into filter-trapped solids [FTSs] and filtrates) using 450 nm membrane filters, and subsequently concentrated to 2 mL (1000×) using 10,000 Da MW cutoff centrifugal filters. The 24 concentrates were subjected to RNA extraction, CanPV complete capsid single-contig RT-PCR, Illumina sequencing, phylogenetics, immuno-informatics, and structure prediction. We detected CanPVs in 58.3% (14/24) of the samples generated 13,824,046 trimmed Illumina reads and 27 CanPV contigs. Phylogenetic and pairwise identity analyses showed eight CanPV genotypes (intragenotype divergence <14%) belonging to four clusters, with intracluster divergence of <20%. Similarity analysis, immuno-informatics, and virus protomer and capsid structure prediction suggested that the four clusters were likely distinct serological types, with predicted cluster-distinguishing B-cell epitopes clustered in the northern and southern rims of the canyon surrounding the 5-fold axis of symmetry. Our approach allows forgenotype-to-serotype characterization of uncultivated picornavirus sequences by coupling phylogenetics, immuno-informatics, and virus capsid structure prediction. This consequently bypasses a major wet lab-associated bottleneck, thereby allowing resource-limited settings to leapfrog from wastewater-sourced genomic data to valuable immunological insights necessary for the development of prophylaxis and other mitigation measures.