Polyurethanes powder lacquers were obtained in a reaction hydroxy terminated polyester resin RUCOTE 102 and blocked polyisocyanate crosslinkers. The polyisocyanates were synthesized using alicyclic diisocyanates (IPDI and H₁₂MDI) and monohydric aliphatic alcohols as well as dibutyltin dilaurate and triethylamine as a catalysts. The biodegradation experiments were realized in solution consisted of lipase (Novozym 735, Novozym 51,032, Lipolase 100L or Palatase 20,000) and phosphate buffer during 42 days at 37 °C. The biodegradation progress was controlled by using optical microscopy method, thermal analysis TG/DTA, DSC method, surface free energy parameters, total organic carbon measurements and sample weight loss. The three-dimensional surface topography of the powder lacquers by means of confocal microscope was investigated. The values of surface roughness parameters were calculated.