Fabrice Malergue

Dr. Fabrice Malergue

orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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25 July 2019 in JCI Insight
Verified
Journal Article
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Alexia Melanie LOPRESTIAlexia Melanie LOPRESTI
Alexia Melanie LOPRESTI
FMFabrice Malergue
Fabrice Malergue
FBFrançois Bertucci
François Bertucci
MLMARIA LUCIA LIBERATOSCIOLI
MARIA LUCIA LIBERATOSCIOLI
SGSeverine Garnier
Severine Garnier
Emilie MamessierEmilie Mamessier
Emilie Mamessier
Circulating tumor cells (CTCs) provide easy, repeatable, and representative access to information regarding solid tumors. However, their detection remains difficult because of their paucity, their short half-life, and the lack of reliable surface biomarkers. Flow cytometry (FC) is a fast, sensitive, and affordable technique, ideal for rare-cell detection. Adapted to CTC detection (i.e., extremely rare cells), most FC-based techniques require a time-consuming pre-enrichment step, followed by a 2-hour staining procedure, impeding the efficiency of CTC detection. We overcame these caveats and reduced the procedure to less than 1 hour, with minimal manipulation. First, cells were simultaneously fixed, permeabilized, and then stained. Second, using low-speed FC acquisition conditions and 2 discriminators (cell size and pan-cytokeratin expression), we suppressed the pre-enrichment step. Applied to blood from donors with or without known malignant diseases, this protocol ensures a high recovery of the cells of interest independently of their epithelial-mesenchymal plasticity and can predict which samples are derived from cancer donors. This proof-of-concept study lays the bases of a sensitive tool to detect CTCs from a small amount of blood upstream of in-depth analyses.

25 January 2021 in Cytometry Part A
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Journal Article
Open access
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PBPénélope Bourgoin
Pénélope Bourgoin
TSThomas Soliveres
Thomas Soliveres
ABAlexandra Barbaresi
Alexandra Barbaresi
ALAnderson Loundou
Anderson Loundou
IBInès Ait Belkacem
Inès Ait Belkacem
TMThibaut Markarian
Thibaut Markarian
The identification of a bacterial, viral, or even noninfectious cause is essential in the management of febrile syndrome in the emergency department (ED), especially in epidemic contexts such as flu or CoVID‐19. The aim was to assess discriminative performances of two biomarkers, CD64 on neutrophils (nCD64) and CD169 on monocytes (mCD169), using a new flow cytometry procedure, in patients presenting with fever to the ED during epidemics. Eighty five adult patients presenting with potential infection were included during the 2019 flu season in the ED of La Timone Hospital. They were divided into four diagnostic outcomes according to their clinical records: no‐infection, bacterial infection, viral infection and co‐infection. Seventy six patients with confirmed SARS‐CoV‐2 infection were also compared to 48 healthy volunteers. For the first cohort, 38 (45%) patients were diagnosed with bacterial infections, 11 (13%) with viral infections and 29 (34%) with co‐infections. mCD169 was elevated in patients with viral infections, with a majority of Flu A virus or Respiratory Syncytial Virus, while nCD64 was elevated in subjects with bacterial infections, with a majority of Streptococcus pneumoniae and Escherichia coli. nCD64 and mCD169 showed 90% and 80% sensitivity, and 78% and 91% specificity, respectively, for identifying patients with bacterial or viral infections. When studied in a second cohort, mCD169 was elevated in 95% of patients with SARS‐CoV‐2 infections and remained at normal level in 100% of healthy volunteers. nCD64 and mCD169 have potential for accurately distinguishing bacterial and acute viral infections. Combined in an easy and rapid flow cytometry procedure, they constitute a potential improvement for infection management in the ED, and could even help for triage of patients during emerging epidemics.

16 October 2019 in Biomarkers in Medicine
Verified
Journal Article
Closed access
PBPénélope Bourgoin
Pénélope Bourgoin
TSThomas Soliveres
Thomas Soliveres
DADalia Ahriz
Dalia Ahriz
IAIsabelle Arnoux
Isabelle Arnoux
CMChristian Meisel
Christian Meisel
TMThibaut Markarian
Thibaut Markarian
Aim: Management of patients with infections within the Emergency Department (ED) is challenging for practitioners, as the identification of infectious causes remains difficult with current techniqu...

10 May 2019 in Journal of Immunological Methods
Verified
Journal Article
Closed access
PBPénélope Bourgoin
Pénélope Bourgoin
JHJack Hayman
Jack Hayman
TRThomas Rimmelé
Thomas Rimmelé
FVFabienne Venet
Fabienne Venet
FMFabrice Malergue
Fabrice Malergue
GMGuillaume Monneret
Guillaume Monneret

18 July 2021 in Advanced Science
Verified
Journal Article
Open access
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IBInes Ait Belkacem
Ines Ait Belkacem
NMNoushine Mossadegh‐Keller
Noushine Mossadegh‐Keller
PBPenelope Bourgoin
Penelope Bourgoin
IAIsabelle Arnoux
Isabelle Arnoux
MLMarie Loosveld
Marie Loosveld
FMFabrice Malergue
Fabrice Malergue
Blood cell analysis is a major pillar of biomedical research and healthcare. These analyses are performed in central laboratories. Rapid shipment from collection site to the central laboratories is currently needed because cells and biomarkers degrade rapidly. The dried blood spot from a fingerstick allows the preservation of cellular molecules for months but entire cells are never recovered. Here leucocyte elution is optimized from dried blood spots. Flow cytometry and mRNA expression profiling are used to analyze the recovered cells. 50–70% of the leucocytes that are dried on a polyester solid support via elution after shaking the support with buffer are recovered. While red blood cells lyse upon drying, it is found that the majority of leucocytes are preserved. Leucocytes have an altered structure that is improved by adding fixative in the elution buffer. Leucocytes are permeabilized, allowing an easy staining of all cellular compartments. Common immunophenotyping and mRNAs are preserved. The ability of a new biomarker (CD169) to discriminate between patients with and without Severe Acute Respiratory Syndrome induced by Coronavirus 2 (SARS‐CoV‐2) infections is also preserved. Leucocytes from blood can be dried, shipped, and/or stored for at least 1 month, then recovered for a wide variety of analyses, potentially facilitating biomedical applications worldwide.

18 December 2021 in Pathogens
Verified
Journal Article
Open access
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antonella minutoloantonella minutolo
antonella minutolo
VPVita Petrone
Vita Petrone
MFMarialaura Fanelli
Marialaura Fanelli
Marco IannettaMarco Iannetta
Marco Iannetta
MGMartina Giudice
Martina Giudice
Claudia MatteucciClaudia Matteucci
Claudia Matteucci
Background: Sialoadhesin (CD169) has been found to be overexpressed in the blood of COVID-19 patients and identified as a biomarker in early disease. We analyzed CD169 in the blood cells of COVID-19 patients to assess its role as a predictive marker of disease progression and clinical outcomes. Methods: The ratio of the median fluorescence intensity of CD169 between monocytes and lymphocytes (CD169 RMFI) was analyzed by flow cytometry in blood samples of COVID-19 patients (COV) and healthy donors (HDs) and correlated with immunophenotyping, inflammatory markers, cytokine mRNA expression, pulmonary involvement, and disease progression. Results: CD169 RMFI was high in COV but not in HDs, and it correlated with CD8 T-cell senescence and exhaustion markers, as well as with B-cell maturation and differentiation in COV. CD169 RMFI correlated with blood cytokine mRNA levels, inflammatory markers, and pneumonia severity in patients who were untreated at sampling, and was associated with the respiratory outcome throughout hospitalization. Finally, we also report the first evidence of the specific ability of the spike protein of SARS-CoV-2 to trigger CD169 RMFI in a dose-dependent manner in parallel with IL-6 and IL-10 gene transcription in HD PBMCs stimulated in vitro. Conclusion: CD169 is induced by the spike protein and should be considered as an early biomarker for evaluating immune dysfunction and respiratory outcomes in COVID-19 patients.