Chun Fu

Dr. Chun Fu

Leshan Normal University

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 April 2019 in Biotechnology for Biofuels
Verified
Journal Article
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CLChaobing Luo
Chaobing Luo
YLYuanqiu Li
Yuanqiu Li
YCYing Chen
Ying Chen
CFChun Fu
Chun Fu
WLWencong Long
Wencong Long
YYYaojun Yang
Yaojun Yang
Gut symbiotic microbiota plays a critical role in nutrient supply, digestion, and absorption. The bamboo snout beetle, Cyrtotrachelus buqueti, a common pest of several bamboo species, exhibits high lignocellulolytic enzyme activity and contains various CAZyme genes. However, to date, no studies have evaluated the role of gut symbiotic microbiota of the snout beetle on bamboo lignocellulose degradation. Therefore, the present study investigated the role of gut symbiotic microbiota of C. buqueti on bamboo lignocellulose degradation. Gut symbiotic microbiota of female (CCJ), male (XCJ), and larvae (YCJ) beetles was used to treat bamboo shoot particles (BSPs) in vitro for 6 days. Scanning electron microscopy (SEM) revealed significant destruction of the lignocellulose structure after treatment, which was consistent with the degradation efficiencies of CCJ, XCJ, and YCJ for cellulose (21.11%, 17.58% and 18.74%, respectively); hemicellulose (22.22%, 27.18% and 34.20%, respectively); and lignin (19.83%, 24.30% and 32.97%, respectively). Gut symbiotic microbiota of adult and larvae beetles was then identified using 16sRNA sequencing, which revealed that four microbes: Lactococcus, Serratia, Dysgonomonas and Enterococcus, comprise approximately 84% to 94% of the microbiota. Moreover, the genomes of 45 Lactococcus, 72 Serratia, 86 Enterococcus and 4 Dysgonomonas microbes were used to analyse resident CAZyme genes. These results indicated that gut symbiotic microbiota of adult and larvae C. buqueti is involved in the lignocellulose degradation traits shown by the host. This study shows that the gut symbiotic microbiota of C. buqueti participates in bamboo lignocellulose degradation, providing innovative findings for bamboo lignocellulose bioconversion. Furthermore, the results of this study will allow us to further isolate lignocellulose-degrading microbiota for use in bamboo lignocellulose bioconversion.

1 April 2019 in Biotechnology for Biofuels
Verified
Journal Article
Open access
PDF file
CLChaobing Luo
Chaobing Luo
YLYuanqiu Li
Yuanqiu Li
YCYing Chen
Ying Chen
CFChun Fu
Chun Fu
XNXiang Nong
Xiang Nong
YYYaojun Yang
Yaojun Yang
As an important biomass raw material, the lignocellulose in bamboo is of significant value in energy conversion. The conversion of bamboo lignocellulose into fermentable reducing sugar, i.e. the degradation of bamboo lignocellulose, is an important step in lignocellulose conversion. However, little research has focussed on excavating the enzymes and microbes that are related to the degradation of bamboo lignocellulose, which is important for its utilisation. This study used Cyrtotrachelus buqueti (bamboo snout beetle) to evaluate the efficiency of bamboo lignocellulose degradation. RNA sequencing was conducted to sequence the transcriptome of the insect before and after feeding on bamboo shoots. The expression levels of genes encoding several carbohydrate-active enzymes, such as endoglucanase (evgtrinloc27093t1 and evgtrinloc16407t0) and laccase (evgtrinloc15173t0 and evgtrinloc11252t0), were found to be upregulated after feeding. Faecal component analysis showed that the degradation efficiencies of cellulose, hemicellulose and lignin were 61.82%, 87.65% and 69.05%, respectively. After 6 days of co-culture with crude enzymes in vitro, the degradation efficiencies of cellulose, hemicellulose and lignin in bamboo shoot particles (BSPs) were 24.98%, 37.52% and 26.67%, respectively. These results indicated that lignocellulosic enzymes and related enzymes within the insect itself co-degraded bamboo lignocellulose. These finding can potentially be used for the pre-treatment and enzymatic hydrolysis of bamboo lignocellulose. Our results showed that intestinal digestive enzymes from C. buqueti degraded bamboo shoot lignocellulose both in vivo and in vitro. In addition, the expression levels of many carbohydrate-active enzyme (CAZyme) genes were upregulated in the transcriptome, including those for cellulase, xylanase and ligninase genes. Therefore, we proposed a scheme for applying the lignocellulolytic enzymes from C. buqueti to degrade bamboo lignocellulose using genetic, enzymatic and fermentation engineering techniques to overexpress the lignocellulolytic enzymes genes in vitro and obtain large quantities of enzymes that could efficiently degrade bamboo lignocellulose and be used for lignocellulose bioconversion.

18 July 2024 in BMC Genomics
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Journal Article
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CFChun Fu
Chun Fu
YXYuJie Xiao
YuJie Xiao
NJNa Jiang
Na Jiang
YYYaoJun Yang
YaoJun Yang
DNA binding with one finger(Dof) gene family is a class of transcription factors which play an important role on plant growth and development. Genome-wide identification results indicated that there were 45 Dof genes(ColDof) in C.oleifera genome. All 45 ColDof proteins were non-transmembrane and non-secretory proteins. Phosphorylation site analysis showed that biological function of ColDof proteins were mainly realized by phosphorylation at serine (Ser) site. The secondary structure of 44 ColDof proteins was dominated by random coil, and only one ColDof protein was dominated by α-helix. ColDof genes’ promoter region contained a variety of cis-acting elements, including light responsive regulators, gibberellin responsive regulators, abscisic acid responsive regulators, auxin responsive regulators and drought induction responsive regulators. The SSR sites analysis showed that the proportion of single nucleotide repeats and the frequency of A/T in ColDof genes were the largest. Non-coding RNA analysis showed that 45 ColDof genes contained 232 miRNAs. Transcription factor binding sites of ColDof genes showed that ColDof genes had 5793 ERF binding sites, 4381 Dof binding sites, 2206 MYB binding sites, 3702 BCR-BPC binding sites. ColDof9, ColDof39 and ColDof44 were expected to have the most TFBSs. The collinearity analysis showed that there were 40 colinear locis between ColDof proteins and AtDof proteins. Phylogenetic analysis showed that ColDof gene family was most closely related to that of Camellia sinensis var. sinensis cv.Biyun and Camellia lanceoleosa. Protein-protein interaction analysis showed that ColDof34, ColDof20, ColDof28, ColDof35, ColDof42 and ColDof26 had the most protein interactions. The transcriptome analysis of C. oleifera seeds showed that 21 ColDof genes were involved in the growth and development process of C. oleifera seeds, and were expressed in 221 C. oleifera varieties. The results of qRT-PCR experiments treated with different concentrations NaCl and PEG6000 solutions indicated that ColDof1, ColDof2, ColDof14 and ColDof36 not only had significant molecular mechanisms for salt stress tolerance, but also significant molecular functions for drought stress tolerance in C. oleifera. The results of this study provide a reference for further understanding of the function of ColDof genes in C.oleifera.

7 October 2024 in Insects
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Journal Article
Open access
CFChun Fu
Chun Fu
QQQian Qianqian
Qian Qianqian
XDXinqi Deng
Xinqi Deng
ZZZhihang Zhuo
Zhihang Zhuo
Danping XuDanping Xu
Danping Xu
The Asiatic rhinoceros beetle, Oryctes rhinoceros (Linnaeus, 1758) (Coleoptera: Scarabaeidae), is a destructive invasive species that poses a serious threat to palms, oil palms, and other plants. Defining a suitable area for the distribution of O. rhinoceros is essential for the development of appropriate policies and preventive measures. In this work, the MaxEnt niche model and ArcGIS software were used to predict the potential geographic distribution of O. rhinoceros in the world based on occurrence data and related environmental variables and to speculate on the influence of environmental variables on the distribution of O. rhinoceros. The results showed that the suitable areas of O. rhinoceros beetle were mainly distributed in 30° N–30° S, and the highly suitable areas were concentrated in South Asia, East Asia, Southeast Asia, and northern Oceania. The key environmental variables that determine the distribution location of O. rhinoceros are Precipitation of Wettest Month (bio13), Temperature of July (tmin7), Minimum Temperature of November (tmin11), and Precipitation of September (prec9). The prediction results of the MaxEnt model can reflect the global distribution of O. rhinoceros. This study can provide a theoretical basis for the prevention and control of O. rhinoceros and the development of relevant quarantine measures.

3 July 2024 in BMC Genomics
Verified
Journal Article
Open access
PDF file
CFChun Fu
Chun Fu
ZLZiHui Liao
ZiHui Liao
NJNa Jiang
Na Jiang
YYYaoJun Yang
YaoJun Yang
Dof transcription factor family in Cyperus esculentus genome was identified and analyzed using bioinformatics. The analysis results revealed that C.esculentus genome contains 29 Dof genes (CesDof), all of which are located in the nucleus according to subcellular localization prediction. CesDof proteinrs have a range of 124 to 512 amino acids, with most being basic proteins. Their secondary structure was mainly irregular curl. The promoter sequence of CesDof genes contains cis-acting elements that respond to light, drought, hormones, low temperature, and circadian rhythm. Codon preference analysis showed that CesDof genes' codon preference ends in T/A. Collinearity analysis revealed that C.esculentus had three pairs of collinear CesDof genes. Additionally, there were 15 pairs of collinear genes between C.esculentus and Arabidopsis thaliana. The genetic relationship between C.esculentus and Rhynchospora pubera was found to be the closest. Phylogenetic tree analysis revealed that 29 CesDof genes of C.esculentus can be classified into 4 subgroups. Additionally, 144 miRNAs were predicted to target these CesDof genes. Furthermore, protein interaction analysis indicated that 15 Dof proteins in C.esculentus had interactions. The qRT-PCR verification results of drought stress and salt stress treatment experiments showed that most CesDof genes were involved in drought stress and salt stress responses, and the gene expression trends under drought stress and salt stress conditions were consistent. These results lay a theoretical foundation for further studying the molecular functions of Dof gene family in C.esculentus and its molecular mechanisms in regulating the life activities of C.esculentus.

22 October 2024 in Ecology and Evolution
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Journal Article
Open access
CFChun Fu
Chun Fu
XWXuanye Wen
Xuanye Wen
THTingting Huang
Tingting Huang
YWYanli Wang
Yanli Wang
XLXiu Liu
Xiu Liu
PZPeng Jin Zhao
Peng Jin Zhao
Ceracris nigricornis Walker is an insect of the Acrididae, which can harm bamboo, rice, corn, sorghum and other crops, and can cause serious economic losses. In this study, based on 234 occurrence sites of C. nigricornis obtained from the Global Biodiversity Information Facility and literature, and data of three future climate scenarios presented by CMIP6, two niche models (GARP, MaxEnt) were used to predict the suitable area of C. nigricornis in China. The result shows that the main environmental factors affecting the distribution of C. nigricornis are min temperature of coldest month (bio6), mean temperature of coldest quarter (bio11), precipitation of driest month (bio14) and precipitation of wettest quarter (bio16). From the result of MaxEnt model, it can be seen that the suitable area of C. nigricornis in China is 128.91 × 104 km2 under current scenario. It will decrease by 3.19% in the 2050s and then increase by 12.04% in the 2090s under the SSP1‐2.6 scenario, increase by 5.79% in the 2050s and then decrease by 7.53% in the 2090s under the SSP2‐4.5 scenario, and increase by 33.03% in 2050s and then decrease by 23.31% in the 2090s under SSP5‐8.5 scenario. From the result of GARP model, it can be seen that the suitable area of C. nigricornis in China is 166.09 × 104 km2 under current scenario. It will increase by 8.41% in 2050s and then continue to increase by 6.11% in 2090s under SSP1‐2.6 scenario, increase by 23.84% in the 2050s and then decrease by 0.88% in the 2090s under the SSP2‐4.5 scenario, and increase by 34.37% in 2050s and then decrease by 1.75% in 2090s under SSP5‐8.5 scenario. The boundaries of suitable areas will expand to the north and southwest of China under future climate change scenarios, specially in Sichuan, Chongqing and Yunnan. Local forestry authorities should strengthen the monitoring of bamboo forests to prevent the damage caused by the introduction of C. nigricornis.