Lydia Rhyman

Dr. Lydia Rhyman

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Research Focus & Metrics

Academic Career Length

18Years (2009-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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6 February 2019 in Royal Society Open Science
Verified
Journal Article
Open access
HBHanusha Bhakhoa
Hanusha Bhakhoa
LRLydia Rhyman
Lydia Rhyman
PRPonnadurai Ramasami
Ponnadurai Ramasami
Novichoks are the suspected nerve agents in the March 2018 Skripal poisoning. In this context, the novichok agent A234 (chemical structure proposed by Mirzayanov) was studied using computational methods to shed light on its molecular, electronic, spectroscopic, thermodynamic and toxicity parameters as well as on potential thermal and hydrolysis degradation pathways. The poisoning action and antidote of A234 were also investigated. Some of these parameters were compared to three common G- and V-series nerve agents, namely GB, VR and VX. The research findings should be useful towards the detection, development of antidotes and destruction of A234.

9 June 2021 in Natural Product Research
Verified
Journal Article
Closed access
MAMisbaudeen Abdul-Hammed
Misbaudeen Abdul-Hammed
IAIbrahim Olaide Adedotun
Ibrahim Olaide Adedotun
MOMonsurat Olajide
Monsurat Olajide
CIChristianah Otoame Irabor
Christianah Otoame Irabor
TATolulope Irapada Afolabi
Tolulope Irapada Afolabi
PRPonnadurai Ramasami
Ponnadurai Ramasami
The current research used a virtual screening method to study 57 isolated phytochemicals (alkaloids, phytosterols, and flavonoids) against the SARS-CoV-2 main protease (Mpro). The absorption, distribution, metabolism, excretion, and toxicity (ADMET) of the selected compounds were analysed using admetSAR tool while SwissADME and Molinspiration chemoinformatics tools were used to examine the oral bioavailability and drug-likeness properties. Parameters such as physicochemical properties, activity spectra for substances (PASS) prediction, bioactivity, binding mode, and molecular interactions were also analysed. Our results favoured Lupeol (–8.6 kcal/mol), Lupenone (–7.7 kcal/mol), Hesperetin (–7.4 kcal/mol), Apigenin (–7.3 kcal/mol) and Castasterone (–7.3 kcal/mol) as probable inhibitors of SARS-CoV-2. This is because of their good binding affinities, bioactivities, drug-likeness, ADMET properties, PASS properties, oral bioavailability, binding mode and their interactions with the active site of the target receptor compared to Remdesivir and Azithromycin. Therefore, these compounds could be explored towards the development of new therapeutic agents against SARS-CoV-2. Graphical Abstract

1 January 2016 in Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy
Verified
Journal Article
Closed access
SMSachin N. Margar
Sachin N. Margar
LRLydia Rhyman
Lydia Rhyman
PRPonnadurai Ramasami
Ponnadurai Ramasami
NSNagaiyan Sekar
Nagaiyan Sekar

27 July 2020 in RSC Advances
Verified
Journal Article
Open access
PDF file
YIYadhav A. Imrit
Yadhav A. Imrit
HBHanusha Bhakhoa
Hanusha Bhakhoa
TSTetiana Sergeieva
Tetiana Sergeieva
SDSergi Danés
Sergi Danés
NSNandini Savoo
Nandini Savoo
PRPonnadurai Ramasami
Ponnadurai Ramasami
A theoretical study of the hydrolysis mechanism of A-234 [EtO–P(O)(F)–NC(Me)–N(Et)2]; the suspected novichok agent in the Skripal attack.

10 October 2019 in Pathogens
Verified
Journal Article
Open access
PDF file
Zehra EdisZehra Edis
Zehra Edis
Samir Haj BloukhSamir Haj Bloukh
Samir Haj Bloukh
HSHamed Sami Abu Sara
Hamed Sami Abu Sara
HBHanusha Bhakhoa
Hanusha Bhakhoa
LRLydia Rhyman
Lydia Rhyman
PRPonnadurai Ramasami
Ponnadurai Ramasami
Antimicrobial agents containing symmetrical triiodides complexes with halogen bonding may release free iodine molecules in a controlled manner. This happens due to interactions with the plasma membrane of microorganisms which lead to changes in the structure of the triiodide anion. To verify this hypothesis, the triiodide complex [Na(12-crown-4)2]I3 was prepared by an optimized one-pot synthesis and tested against 18 clinical isolates, 10 reference strains of pathogens and five antibiotics. The antimicrobial activities of this symmetrical triiodide complex were determined by zone of inhibition plate studies through disc- and agar-well-diffusion methods. The triiodide complex proved to be a broad spectrum microbicidal agent. The biological activities were related to the calculated partition coefficient (octanol/water). The microstructural analysis of SEM and EDS undermined the purity of the triiodide complex. The anionic structure consists of isolated, symmetrical triiodide anions [I-I-I]− with halogen bonding. Computational methods were used to calculate the energy required to release iodine from [I-I-I]− and [I-I···I]−. The halogen bonding in the triiodide ion reduces the antibacterial activities in comparison to the inhibitory actions of pure iodine but increases the long term stability of [Na(12-crown-4)2]I3.

16 February 2016 in Chemistry – A European Journal
Verified
Journal Article
Closed access
PDF file
JLJalal Z. A. Laloo
Jalal Z. A. Laloo
LRLydia Rhyman
Lydia Rhyman
PRPonnadurai Ramasami
Ponnadurai Ramasami
FBF. Matthias Bickelhaupt
F. Matthias Bickelhaupt
ACAbel De Cózar
Abel De Cózar