Takuma Kumamoto

Dr. Takuma Kumamoto

orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 August 2020 in Neuron
Verified
Journal Article
Open access
TKTakuma Kumamoto
Takuma Kumamoto
FMFranck Maurinot
Franck Maurinot
RBRaphaëlle Barry-Martinet
Raphaëlle Barry-Martinet
CVCélia Vaslin
Célia Vaslin
SVSandrine Vandormael-Pournin
Sandrine Vandormael-Pournin
JLJean Livet
Jean Livet
Stable genomic integration of exogenous transgenes is essential in neurodevelopmental and stem cell studies. Despite tools driving increasingly efficient genomic insertion with DNA vectors, transgenesis remains fundamentally hindered by the impossibility of distinguishing integrated from episomal transgenes. Here, we introduce an integration-coupled On genetic switch, iOn, which triggers gene expression upon incorporation into the host genome through transposition, thus enabling rapid and accurate identification of integration events following transfection with naked plasmids. In vitro, iOn permits rapid drug-free stable transgenesis of mouse and human pluripotent stem cells with multiple vectors. In vivo, we demonstrate faithful cell lineage tracing, assessment of regulatory elements, and mosaic analysis of gene function in somatic transgenesis experiments that reveal neural progenitor potentialities and interaction. These results establish iOn as a universally applicable strategy to accelerate and simplify genetic engineering in cultured systems and model organisms by conditioning transgene activation to genomic integration.

26 March 2021 in Science Advances
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Journal Article
Open access
PDF file
SMSatoko Miyatake
Satoko Miyatake
MKMitsuhiro Kato
Mitsuhiro Kato
TKTakuma Kumamoto
Takuma Kumamoto
THTomonori Hirose
Tomonori Hirose
EKEriko Koshimizu
Eriko Koshimizu
NMNaomichi Matsumoto
Naomichi Matsumoto
ATP1A3 , a mutated gene for AHC, RDP, and CAPOS, is also associated with polymicrogyria by different functional variants.

Verified
Journal Article
Open access
PDF file
TKTakuma Kumamoto
Takuma Kumamoto
TTTomokazu Tsurugizawa
Tomokazu Tsurugizawa
Astrocytes provide trophic and metabolic support to neurons and modulate circuit formation during development. In addition, astrocytes help maintain neuronal homeostasis through neurovascular coupling, blood–brain barrier maintenance, clearance of metabolites and nonfunctional proteins via the glymphatic system, extracellular potassium buffering, and regulation of synaptic activity. Thus, astrocyte dysfunction may contribute to a myriad of neurological disorders. Indeed, astrocyte dysfunction during development has been implicated in Rett disease, Alexander’s disease, epilepsy, and autism, among other disorders. Numerous disease model mice have been established to investigate these diseases, but important preclinical findings on etiology and pathophysiology have not translated into clinical interventions. A multidisciplinary approach is required to elucidate the mechanism of these diseases because astrocyte dysfunction can result in altered neuronal connectivity, morphology, and activity. Recent progress in neuroimaging techniques has enabled noninvasive investigations of brain structure and function at multiple spatiotemporal scales, and these technologies are expected to facilitate the translation of preclinical findings to clinical studies and ultimately to clinical trials. Here, we review recent progress on astrocyte contributions to neurodevelopmental and neuropsychiatric disorders revealed using novel imaging techniques, from microscopy scale to mesoscopic scale.

3 December 2014 in Planta Medica
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Journal Article
Closed access
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TSTakayuki Sogo
Takayuki Sogo
TKTakuma Kumamoto
Takuma Kumamoto
HIHisako Ishida
Hisako Ishida
AHAyami Hisanaga
Ayami Hisanaga
KSKozue Sakao
Kozue Sakao
DHDe-Xing Hou
De-Xing Hou
Although anthocyanins are major forms distributed in many plant foods and promising as chemopreventive source, many molecular data are obtained from anthocyanidins, showing their low bioavailability. This study aims to clarify the inhibitory effects of delphinidin glycosides on cell transformation comparing them to those of delphinidin. Screening data revealed that delphinidin 3-sambubioside could directly bind to MAPK/ERK kinase 1. Affinity assay data confirmed that delphinidin 3-sambubioside had higher binding affinity to MAPK/ERK kinase 1 than ERK1/2 and B-Raf. Colony assay data further demonstrated that delphinidin 3-sambubioside inhibited 12-O- tetradecanoylphorbol-13-acetate-induced phosphorylation of MAPK/ERK kinase 1 and sequentially suppressed cell transformation. All of these effects caused by delphinidin 3-sambubioside were weaker than those by its aglycon, delphinidin. Our data suggested that the weaker anti- transformation activity of delphinidin glycosides compared to that of their aglycon is due to lower binding affinity to the target molecule MAPK/ERK kinase 1.

30 May 2024 in Journal of Comparative Neurology
Verified
Journal Article
Closed access
RKRyoka Katayama
Ryoka Katayama
TKTakuma Kumamoto
Takuma Kumamoto
KWKyosuke Wada
Kyosuke Wada
CHCarina Hanashima
Carina Hanashima
Chiaki Ohtaka-MaruyamaChiaki Ohtaka-Maruyama
Chiaki Ohtaka-Maruyama

12 July 2025 in Scientific Data
Verified
Journal Article
Open access
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TTTomokazu Tsurugizawa
Tomokazu Tsurugizawa
YKYuji Komaki
Yuji Komaki
IAIllia Aota
Illia Aota
Makoto SuematsuMakoto Suematsu
Makoto Suematsu
Chiaki Ohtaka-MaruyamaChiaki Ohtaka-Maruyama
Chiaki Ohtaka-Maruyama
TKTakuma Kumamoto
Takuma Kumamoto
Understanding brain evolution requires detailed comparative analyses of brain structures across species. However, high-resolution anatomical and connective data remain limited for most vertebrates beyond a few well-studied model organisms. To address this gap, we collected postmortem brain samples from a range of vertebrates, primarily small amniotes, and performed magnetic resonance imaging and histological staining. Here, we present the “Animal Brain Collection (ABC),” a freely accessible database that enables researchers to examine and compare cellular and tissue-level brain architectures across species. This resource provides a foundation for cross-species investigations of brain structure and development, offering new opportunities for research into the diversity and evolution of vertebrate brains.