Anna Kim

Dr. Anna Kim

orcid

Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
31 January 2017 in Lab on a Chip
Verified
Journal Article
Closed access
PDF file
ANAdam L. Nekimken
Adam L. Nekimken
HFHolger Fehlauer
Holger Fehlauer
AKAnna Kim
Anna Kim
SMSandra N. Manosalvas-Kjono
Sandra N. Manosalvas-Kjono
PLPurim Ladpli
Purim Ladpli
MKMichael Krieg
Michael Krieg
A new microfluidic tool for simultaneous immobilization, force delivery and high resolution imaging of neuronal activity in living Caenorhabditis elegans .

1 January 2017 in Biomicrofluidics
Verified
Journal Article
Open access
PDF file
AKAnna Kim
Anna Kim
KKK. Kustanovich
K. Kustanovich
DBD. Baratian
D. Baratian
AAAlar Ainla
Alar Ainla
MSM. Shaali
M. Shaali
Aldo JesorkaAldo Jesorka
Aldo Jesorka
We present a process for fabrication of free-standing SU-8 probes, with a dry, mechanical release of the final micro-devices. The process utilizes the thermal release tape, a commonly used cleanroom material, for facile heat-release from the sacrificial layer. For characterization of the SU-8 microfluidic probes, two liquid interfaces were designed: a disposable interface with integrated wells and an interface with external liquid reservoirs. The versatility of the fabrication and the release procedures was illustrated by further developing the process to functionalize the SU-8 probes for impedance sensing, by integrating metal thin-film electrodes. An additional interface scheme which contains electronic components for impedance measurements was developed. We investigated the possibilities of introducing perforations in the SU-8 device by photolithography, for solution sampling predominantly by diffusion. The SU-8 processes described here allow for a convenient batch production of versatile free-standing microfluidic devices with well-defined tip-geometry.

1 January 2018
Verified
Book Chapter
Closed access
AKAnna Kim
Anna Kim
ANAdam L. Nekimken
Adam L. Nekimken
SFSylvia Fechner
Sylvia Fechner
LOLucy E. O’bRien
Lucy E. O’bRien
BPBeth L. Pruitt
Beth L. Pruitt

19 February 2018 in Journal of Visualized Experiments
Verified
Journal Article
Closed access
PDF file
HFHolger Fehlauer
Holger Fehlauer
ANAdam L. Nekimken
Adam L. Nekimken
AKAnna Kim
Anna Kim
BPBeth L. Pruitt
Beth L. Pruitt
MGMiriam B. Goodman
Miriam B. Goodman
MKMichael Krieg
Michael Krieg
One central goal of mechanobiology is to understand the reciprocal effect of mechanical stress on proteins and cells. Despite its importance, the influence of mechanical stress on cellular function is still poorly understood. In part, this knowledge gap exists because few tools enable simultaneous deformation of tissue and cells, imaging of cellular activity in live animals, and efficient restriction of motility in otherwise highly mobile model organisms, such as the nematode Caenorhabditis elegans. The small size of C. elegans makes them an excellent match to microfluidics-based research devices, and solutions for immobilization have been presented using microfluidic devices. Although these devices allow for high-resolution imaging, the animal is fully encased in polydimethylsiloxane (PDMS) and glass, limiting physical access for delivery of mechanical force or electrophysiological recordings. Recently, we created a device that integrates pneumatic actuators with a trapping design that is compatible with high-resolution fluorescence microscopy. The actuation channel is separated from the worm-trapping channel by a thin PDMS diaphragm. This diaphragm is deflected into the side of a worm by applying pressure from an external source. The device can target individual mechanosensitive neurons. The activation of these neurons is imaged at high-resolution with genetically-encoded calcium indicators. This article presents the general method using C. elegans strains expressing calcium-sensitive activity indicator (GCaMP6s) in their touch receptor neurons (TRNs). The method, however, is not limited to TRNs nor to calcium sensors as a probe, but can be expanded to other mechanically-sensitive cells or sensors.

20 January 2016 in Scientific Reports
Verified
Journal Article
Open access
PDF file
HRH. Rodilla
H. Rodilla
AKAnna Kim
Anna Kim
GJG. D. M. Jeffries
G. D. M. Jeffries
JVJ. Vukusic
J. Vukusic
AJA. Jesorka
A. Jesorka
JSJ. Stake
J. Stake
Studies of biological and artificial membrane systems, such as niosomes, currently rely on the use of fluorescent tags, which can influence the system under investigation. For this reason, the development of label-free, non-invasive detection techniques is of great interest. We demonstrate an open-volume label-free millimeter-wave sensing platform based on a coplanar waveguide, developed for identification and characterization of niosome constituents. A design based on a λ/2-line resonator was used and on-wafer measurements of transmission and reflection parameters were performed up to 110 GHz. Our sensor was able to clearly distinguish between common niosome constituents, non-ionic surfactants Tween 20 and Span 80, measuring a resonance shift of 3 GHz between them. The complex permittivities of the molecular compounds have been extracted. Our results indicate insignificant frequency dependence in the investigated frequency range (3 GHz – 110 GHz). Values of permittivity around 3.0 + 0.7i and 2.2 + 0.4i were obtained for Tween 20 and Span 80, respectively.

19 July 2022 in Journal of Cell Science
Verified
Journal Article
Open access
PDF file
AKAnna Kim
Anna Kim
ANAmanda Nguyen
Amanda Nguyen
MMMarco Marchetti
Marco Marchetti
XDXinXin Du
XinXin Du
DMDenise J. Montell
Denise J. Montell
LOLucy Erin O'BRien
Lucy Erin O'BRien
Cytosolic Ca2+ is a highly dynamic, tightly regulated and broadly conserved cellular signal. Ca2+ dynamics have been studied widely in cellular monocultures, yet organs in vivo comprise heterogeneous populations of stem and differentiated cells. Here, we examine Ca2+ dynamics in the adult Drosophila intestine, a self-renewing epithelial organ in which stem cells continuously produce daughters that differentiate into either enteroendocrine cells or enterocytes. Live imaging of whole organs ex vivo reveals that stem-cell daughters adopt strikingly distinct patterns of Ca2+ oscillations after differentiation: enteroendocrine cells exhibit single-cell Ca2+ oscillations, whereas enterocytes exhibit rhythmic, long-range Ca2+ waves. These multicellular waves do not propagate through immature progenitors (stem cells and enteroblasts), of which the oscillation frequency is approximately half that of enteroendocrine cells. Organ-scale inhibition of gap junctions eliminates Ca2+ oscillations in all cell types – even, intriguingly, in progenitor and enteroendocrine cells that are surrounded only by enterocytes. Our findings establish that cells adopt fate-specific modes of Ca2+ dynamics as they terminally differentiate and reveal that the oscillatory dynamics of different cell types in a single, coherent epithelium are paced independently.