Anaerobic digestion (AD) is a process of degradation of organic matter by microorganisms in an oxygen-free environment, which produces biogas, a vital renewable energy source. Using solely an organic source, such as monosubstrates, it is difficult to optimize the AD process due to nutrient imbalance, lack of appropriate microbial communities, and the effect of operational parameters. This chapter reviews the current studies on biogas production from the anaerobic codigestion process of mixing agricultural byproducts, focusing on rice straw and livestock manure as substrates. Because rice straw is high in cellulose, it needs to be pretreated before feeding into the anaerobic digester. Different rice straw pretreatments are summarized including physical, chemical, and biological methods. Current biogas systems are discussed. The utilization of bioslurry from the anaerobic fermentation process to agricultural cultivation and aquaculture activities is also discussed.

Background: Biochar is a promising material in mitigating greenhouse gases (GHGs) emissions from paddy fields due to its remarkable structural properties. Rice husk biochar (RhB) and melaleuca biochar (MB) are amendment materials that could be used to potentially reduce emissions in the Vietnamese Mekong Delta (VMD). However, their effects on CH4 and N2O emissions and soil under local water management and conventional rice cultivation have not been thoroughly investigated. Methods: We conducted a field experiment using biochar additions to the topsoil layer (0-20 cm). Five treatments comprising 0 t ha-1 (CT0); 5 t ha-1 (RhB5) and 10 t ha-1 (RhB10), and 5 t ha-1 (MB5) and 10 t ha-1 (MB10) were designed plot-by-plot (20 m2) in triplicates. Results: The results showed that biochar application from 5 to 10 t ha-1 significantly decreased cumulative CH4 (24.2-28.0%, RhB; 22.0-14.1%, MB) and N2O (25.6-41.0%, RhB; 38.4–56.4%, MB) fluxes without a reduction in grain yield. Increasing the biochar application rate further did not decrease significantly total CH4 and N2O fluxes but was seen to significantly reduce the global warming potential (GWP) and yield-scale GWP in the RhB treatments. Biochar application improved soil Eh but had no effects on soil pH. Whereas CH4 flux correlated negatively with soil Eh (P < 0.001; r2 = 0.552, RhB; P < 0.001; r2 = 0.502, MB). Ameliorating soil aeration and functions by adding RhB and MB resulted in improving soil physicochemical properties, especially significant SOM and AN boosting, which indicate better soil health, structure, and fertility. Conclusions: Biochar supplementation significantly reduced CH4 and N2O fluxes and improved soil mineralization and physicochemical properties toward beneficial for rice plants. The results suggest that the optimal combination of biochar-application rates and effective water-irrigation techniques for soil types in the MD should be further studied in future works.

Biogas digestive effluent (BDE) is a nutrient-enriched source that can be utilized as an organic fertilizer for rice cultivation without synthetic fertilizer (SF) application. However, a primary concern is the stimulation of methane (CH₄) emissions due to the enrichment of the labile organic carbon, a favorite substrate of methanogenic archaea. Methanotrophs potentially reduce greenhouse gas (GHG) emissions from rice fields owing to metabolizing CH₄ as a carbon source and energy. We therefore examined the effect of the application of methanotroph-inoculated BDE to the rice cultivated paddy soil on GHG emissions and rice productivity under a pot experiment. Methanotrophs (Methylosinus sp. and Methylocystis sp.), isolated from the Vietnamese Mekong Delta’s rice fields, were separately inoculated to the heated BDE, followed by a 5-day preincubation. Methanotroph-inoculated BDE was supplied to rice cultivation to substitute SF at 50% or 100% in terms of nitrogen amount. The results showed that the total CH₄ emissions increased ~34% with the application of BDE. CH₄ emissions were significantly reduced by ~17–21% and ~28–44% under the application of methanotroph-inoculated BDE at 100% and 50%, respectively. The reduction in CH₄ was commensurate with the augmentation of pmoA transcript copy number under methanotroph-inoculated BDE. In addition, methanotroph-inoculated BDE application did not increase nitrous oxide (N₂O) emissions and adversely affect rice growth and grain productivity. This study highlighted the BDE-recirculated feasibility for a lower CH₄ emission rice production based on methanotrophs where high CH₄-emitting fields were confirmed.

Different rice farming systems affect the soil microbial communities. Here, we report the results of 16S rRNA gene amplicon sequencing of soils collected from intensive rice cultivation and rice-shrimp farming systems in Soc Trang, Vietnam. The dominant phyla in these systems were Firmicutes , Actinobacteriota , Chloroflexi , Myxococcota , and Acidobacteriota .

Background: Biochar is a promising material in mitigating greenhouse gases (GHGs) emissions from paddy fields due to its remarkable structural properties. Rice husk biochar (RhB) and melaleuca biochar (MB) are amendment materials that could be used to potentially reduce emissions in the Vietnamese Mekong Delta (VMD). However, their effects on CH4 and N2O emissions and soil under local water management and conventional rice cultivation have not been thoroughly investigated. Methods: We conducted a field experiment using biochar additions to the topsoil layer (0-20 cm). Five treatments comprising 0 t ha-1 (CT0); 5 t ha-1 (RhB5) and 10 t ha-1 (RhB10), and 5 t ha-1 (MB5) and 10 t ha-1 (MB10) were designed plot-by-plot (20 m2) in triplicates. Results: The results showed that biochar application from 5 to 10 t ha-1 significantly decreased cumulative CH4 (24.2 – 28.0%, RhB; 22.0 – 14.1%, MB) and N2O (25.6 – 41.0%, RhB; 38.4 – 56.4%, MB) fluxes without a reduction in grain yield. Increasing the biochar application rate further did not decrease significantly total CH4 and N2O fluxes but was seen to significantly reduce the global warming potential (GWP) and yield-scale GWP in the RhB treatments. Biochar application improved soil Eh but had no effects on soil pH. Whereas CH4 flux correlated negatively with soil Eh (P < 0.001; r2 = 0.552, RhB; P < 0.001; r2 = 0.502, MB). The soil physicochemical properties of bulk density, porosity, organic matter, and anaerobically mineralized N were significantly improved in biochar-amended treatments, while available P also slightly increased. Conclusions: Biochar supplementation significantly reduced CH4 and N2O fluxes and improved soil mineralization and physiochemical properties toward beneficial for rice plant. The results suggest that the optimal combination of biochar-application rates and effective water-irrigation techniques for soil types in the MD should be further studied in future works.