Ali S Alshami

Dr. Ali S Alshami

orcid

Research Focus & Metrics

Academic Career Length

11Years (2016-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
18 October 2023 in Journal of Cheminformatics
Verified
Journal Article
Open access
PDF file
ATArash Tayyebi
Arash Tayyebi
AAAli S Alshami
Ali S Alshami
ZRZeinab Rabiei
Zeinab Rabiei
XYXue Yu
Xue Yu
NINadhem Ismail
Nadhem Ismail
JPJason Power
Jason Power
A reliable and practical determination of a chemical species’ solubility in water continues to be examined using empirical observations and exhaustive experimental studies alone. Predictions of chemical solubility in water using data-driven algorithms can allow us to create a rationally designed, efficient, and cost-effective tool for next-generation materials and chemical formulations. We present results from two machine learning (ML) modeling studies to adequately predict various species’ solubility using data for over 8400 compounds. Molecular-descriptors, the most used method in previous studies, and Morgan fingerprint, a circular-based hash of the molecules' structures, were applied to produce water solubility estimates. We trained all models on 80% of the total datasets using the Random Forest (RFs) technique as the regressor and tested the prediction performance using the remaining 20%, resulting in coefficient of determination (R2) test values of 0.88 and 0.81 and root-mean-square deviation (RMSE) test values 0.64 and 0.80 for the descriptors and circular fingerprint methods, respectively. We interpreted the produced ML models and reported the most effective features for aqueous solubility measures using the Shapley Additive exPlanations (SHAP) and thermodynamic analysis. Low error, ability to investigate the molecular-level interactions, and compatibility with thermodynamic quantities made the fingerprint method a distinct model compared to other available computational tools. However, it is worth emphasizing that physicochemical descriptor model outperformed the fingerprint model in achieving better predictive accuracy for the given test set.

1 May 2021 in Colloids and Surfaces A: Physicochemical and Engineering Aspects
Verified
Journal Article
Closed access
AAAli M. Alkadhem
Ali M. Alkadhem
MEMohammed A.A. Elgzoly
Mohammed A.A. Elgzoly
AAAli S Alshami
Ali S Alshami
SOSagheer A. Onaizi
Sagheer A. Onaizi

1 March 2021 in Journal of Petroleum Science and Engineering
Verified
Journal Article
Closed access
SOSagheer A. Onaizi
Sagheer A. Onaizi
MAMohammed Alsulaimani
Mohammed Alsulaimani
MAMohammed K. Al-Sakkaf
Mohammed K. Al-Sakkaf
SBSalem A. Bahadi
Salem A. Bahadi
MMMohamed Mahmoud
Mohamed Mahmoud
AAAli S Alshami
Ali S Alshami

11 May 2023 in Separation & Purification Reviews
Verified
Journal Article
Closed access
MTMusabbir J. Talukder
Musabbir J. Talukder
AAAli S Alshami
Ali S Alshami
ATArash Tayyebi
Arash Tayyebi
NINadhem Ismail
Nadhem Ismail
XYXue Yu
Xue Yu
The evolving membrane technology integrated with machine learning (ML) algorithms can significantly advance the novel membrane material design and fabrication. Although several studies have reported ML-based assistance in membrane development, none of them have offered a complete analysis of existing ML-assisted membrane fabrication methods from material design perspective. A two-way information gateway is therefore necessary to achieve the desired objective, whereby experienced researchers and data scientists from both sides need to provide valuable insights into novel membrane development process. In this work, we offer a midway platform by providing an overall view and scopes of ML uses in membrane science. This is accomplished by analyzing reported ML-assisted membrane fabrications via lensing through the overall ML development. This work culminates in identifying four crucial factors affecting ML-assisted membrane development: data mining, material functional description, selection of ML models and model interpretation. A future direction is proposed by making specific ML models and descriptors suggestions, in addition to molecular similarity analysis technique and ML-based image processing. We believe the proposed approaches and analyses through our identified lens will prove crucial for the future of ML-assisted membrane material design and development.

1 December 2018 in Desalination
Verified
Journal Article
Closed access
CBChris Buelke
Chris Buelke
AAAli S Alshami
Ali S Alshami
JCJames Casler
James Casler
JLJeremy Lewis
Jeremy Lewis
MAMaram Al-Sayaghi
Maram Al-Sayaghi
MHMichael A. Hickner
Michael A. Hickner

28 February 2023 in Biofuels, Bioproducts and Biorefining
Verified
Journal Article
Closed access
AOAdemola Owoade
Ademola Owoade
AAAli S Alshami
Ali S Alshami
DLDavid Levin
David Levin
SOSagheer Onaizi
Sagheer Onaizi
ZMZuhair O. Malaibari
Zuhair O. Malaibari