Nurdjannah Jane Niode

Dr. Nurdjannah Jane Niode

Sam Ratulangi University, Manado, Sulawesi Utara, Indonesia
orcid

Research Focus & Metrics

Academic Career Length

7Years (2020-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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23 December 2020 in Scientifica
Verified
Journal Article
Open access
PDF file
Trina E. TalleiTrina E. Tallei
Trina E. Tallei
STSefren Geiner Tumilaar
Sefren Geiner Tumilaar
NNNurdjannah Jane Niode
Nurdjannah Jane Niode
FFFatimawali F Fatimawali
Fatimawali F Fatimawali
BKBilly Johnson Kepel
Billy Johnson Kepel
TETalha Bin Emran
Talha Bin Emran
Since the outbreak of the COVID-19 (coronavirus disease 19) pandemic, researchers have been trying to investigate several active compounds found in plants that have the potential to inhibit the proliferation of SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2). The present study aimed to evaluate bioactive compounds found in plants using a molecular docking approach to inhibit the main protease (Mpro) and spike (S) glycoprotein of SARS-CoV-2. The evaluation was performed on the docking scores calculated using AutoDock Vina (AV) as a docking engine. A rule of five (Ro5) was calculated to determine whether a compound meets the criteria as an active drug orally in humans. The determination of the docking score was performed by selecting the best conformation of the protein-ligand complex that had the highest affinity (most negative Gibbs’ free energy of binding/). As a comparison, nelfinavir (an antiretroviral drug), chloroquine, and hydroxychloroquine sulfate (antimalarial drugs recommended by the FDA as emergency drugs) were used. The results showed that hesperidin, nabiximols, pectolinarin, epigallocatechin gallate, and rhoifolin had better poses than nelfinavir, chloroquine, and hydroxychloroquine sulfate as spike glycoprotein inhibitors. Hesperidin, rhoifolin, pectolinarin, and nabiximols had about the same pose as nelfinavir but were better than chloroquine and hydroxychloroquine sulfate as Mpro inhibitors. This finding implied that several natural compounds of plants evaluated in this study showed better binding free energy compared to nelfinavir, chloroquine, and hydroxychloroquine sulfate, which so far are recommended in the treatment of COVID-19. From quantum chemical DFT calculations, the ascending order of chemical reactivity of selected compounds was pectolinarin > hesperidin > rhoifolin > morin > epigallocatechin gallate. All isolated compounds’ C=O regions are preferable for an electrophilic attack, and O-H regions are suitable for a nucleophilic attack. Furthermore, Homo-Lumo and global descriptor values indicated a satisfactory remarkable profile for the selected compounds. As judged by the RO5 and previous study by others, the compounds kaempferol, herbacetin, eugenol, and 6-shogaol have good oral bioavailability, so they are also seen as promising candidates for the development of drugs to treat infections caused by SARS-CoV-2. The present study identified plant-based compounds that can be further investigated in vitro and in vivo as lead compounds against SARS-CoV-2.

3 December 2021 in Evidence-Based Complementary and Alternative Medicine
Verified
Journal Article
Open access
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Trina E. TalleiTrina E. Tallei
Trina E. Tallei
FFFatimawali F Fatimawali
Fatimawali F Fatimawali
NNNurdjannah Jane Niode
Nurdjannah Jane Niode
Rinaldi IdroesRinaldi Idroes
Rinaldi Idroes
BZB. M. Redwan Matin Zidan
B. M. Redwan Matin Zidan
Raffaele CapassoRaffaele Capasso
Raffaele Capasso
Green tea is produced from Camellia sinensis (L.) buds and leaves that have not gone through the oxidation and withering processes used to produce black and oolong teas. It was originated in China, but its cultivation and production have expanded to other Eastern Asian countries. Several polyphenolic compounds, including flavandiols, flavonols, flavonoids, and phenolic acids, are found in green tea and may constitute greater than 30 of the dry weight. Flavonols, especially catechins, represent the majority of green tea polyphenols. Green tea polyphenolic compounds have been reported to confer several health benefits. This review describes the potential use of green tea polyphenols in the management of coronavirus disease 2019 (COVID-19). The immunomodulatory, antibacterial, antioxidant, and anti-inflammatory effects of green tea polyphenols have also been considered in this review. In addition to describing the bioactivities associated with green tea polyphenols, this review discusses the potential delivery of these biomolecules using a nanoparticle drug delivery system. Moreover, the bioavailability and toxicity of green tea polyphenols are also evaluated.

16 June 2022 in Infectious Disease Reports
Verified
Journal Article
Open access
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NNNurdjannah Jane Niode
Nurdjannah Jane Niode
AAAryani Adji
Aryani Adji
SGShienty Gazpers
Shienty Gazpers
RKRenate Tamara Kandou
Renate Tamara Kandou
HPHerry Pandaleke
Herry Pandaleke
Trina E. TalleiTrina E. Tallei
Trina E. Tallei
Crusted scabies is a rare form of scabies that presents with more severe symptoms than those of classic scabies. It is characterized by large crusted lesions, extensive scales, thick hyperkeratosis, and contains a large number of highly contagious itch mites. Crusted scabies is more prevalent in immunocompromised, malnourished, and disabled individuals. This disease has been linked to a variety of health problems, including delayed diagnosis, infection risk, and high mortality, mainly from sepsis, and it has the potential to cause an outbreak due to its hyper-infestation, which makes it highly infectious. This article reports three cases of crusted scabies in North Sulawesi, Indonesia. Recent updates and a comprehensive review of the literature on the disease are also included, emphasizing the critical importance of early diagnosis and effective medical management of patients, which are necessary to prevent the complications and spread in communities.

29 December 2023 in Narra J
Verified
Journal Article
Open access
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Aga MaulanaAga Maulana
Aga Maulana
Teuku Rizky NoviandyTeuku Rizky Noviandy
Teuku Rizky Noviandy
Rivansyah SuhendraRivansyah Suhendra
Rivansyah Suhendra
NENanda Earlia
Nanda Earlia
MBMikyal Bulqiah
Mikyal Bulqiah
Rinaldi IdroesRinaldi Idroes
Rinaldi Idroes
Atopic dermatitis is a prevalent and persistent chronic inflammatory skin disorder that poses significant challenges when it comes to accurately assessing its severity. The aim of this study was to evaluate deep learning models for automated atopic dermatitis severity scoring using a dataset of Aceh ethnicity individuals in Indonesia. The dataset of clinical images was collected from 250 patients at Dr. Zainoel Abidin Hospital, Banda Aceh, Indonesia and labeled by dermatologists as mild, moderate, severe, or none. Five pre-trained convolutional neural networks (CNN) architectures were evaluated: ResNet50, VGGNet19, MobileNetV3, MnasNet, and EfficientNetB0. The evaluation metrics, including accuracy, precision, sensitivity, specificity, and F1-score, were employed to assess the models. Among the models, ResNet50 emerged as the most proficient, demonstrating an accuracy of 89.8%, precision of 90.00%, sensitivity of 89.80%, specificity of 96.60%, and an F1-score of 89.85%. These results highlight the potential of incorporating advanced, data-driven models into the field of dermatology. These models can serve as invaluable tools to assist dermatologists in making early and precise assessments of atopic dermatitis severity and therefore improve patient care and outcomes.

12 December 2023 in Phytotherapy Research
Verified
Journal Article
Closed access
CMChristian Oktavianus Manginstar
Christian Oktavianus Manginstar
Trina E. TalleiTrina E. Tallei
Trina E. Tallei
NNNurdjannah Jane Niode
Nurdjannah Jane Niode
CSChristina Leta Salaki
Christina Leta Salaki
SHSofia Safitri Hessel
Sofia Safitri Hessel

1 January 2022 in Molecules
Verified
Journal Article
Open access
PDF file
Trina E. TalleiTrina E. Tallei
Trina E. Tallei
FFFatimawali F Fatimawali
Fatimawali F Fatimawali
AAAhmad Akroman Adam
Ahmad Akroman Adam
MEMona M. Elseehy
Mona M. Elseehy
AEAhmed El-Shehawi
Ahmed El-Shehawi
TETalha Bin Emran
Talha Bin Emran
Before entering the cell, the SARS-CoV-2 spike glycoprotein receptor-binding domain (RBD) binds to the human angiotensin-converting enzyme 2 (hACE2) receptor. Hence, this RBD is a critical target for the development of antiviral agents. Recent studies have discovered that SARS-CoV-2 variants with mutations in the RBD have spread globally. The purpose of this in silico study was to determine the potential of a fruit bromelain-derived peptide. DYGAVNEVK. to inhibit the entry of various SARS-CoV-2 variants into human cells by targeting the hACE binding site within the RBD. Molecular docking analysis revealed that DYGAVNEVK interacts with several critical RBD binding residues responsible for the adhesion of the RBD to hACE2. Moreover, 100 ns MD simulations revealed stable interactions between DYGAVNEVK and RBD variants derived from the trajectory of root-mean-square deviation (RMSD), radius of gyration (Rg), and root-mean-square fluctuation (RMSF) analysis, as well as free binding energy calculations. Overall, our computational results indicate that DYGAVNEVK warrants further investigation as a candidate for preventing SARS-CoV-2 due to its interaction with the RBD of SARS-CoV-2 variants.