Shawn C. Kefauver

Prof. Shawn C. Kefauver

Integrative Crop Ecophysiology Group, Department B.E.E.C.A. Plant Physiology Section, Faculty of Biology, University of Barcelona, Av Diagonal 643, 08028 Barcelona, Spain
orcid

Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2014 in Trends in Plant Science
Verified
Journal Article
Closed access
JAJosé Luis Araus
José Luis Araus
JCJill Cairns
Jill Cairns

1 May 2018 in Trends in Plant Science
Verified
Journal Article
Open access
JAJosé Luis Araus
José Luis Araus
SKShawn C. Kefauver
Shawn C. Kefauver
MAMainassara Zaman Allah
Mainassara Zaman Allah
MOMike S. Olsen
Mike S. Olsen
JCJill Cairns
Jill Cairns
Inability to efficiently implement high-throughput field phenotyping is increasingly perceived as a key component that limits genetic gain in breeding programs. Field phenotyping must be integrated into a wider context than just choosing the correct selection traits, deployment tools, evaluation platforms, or basic data-management methods. Phenotyping means more than conducting such activities in a resource-efficient manner; it also requires appropriate trial management and spatial variability handling, definition of key constraining conditions prevalent in the target population of environments, and the development of more comprehensive data management, including crop modeling. This review will provide a wide perspective on how field phenotyping is best implemented. It will also outline how to bridge the gap between breeders and 'phenotypers' in an effective manner.

1 May 2020 in Agronomy
Verified
Journal Article
Open access
PDF file
JTJoel Torruella
Joel Torruella
Maria Luisa BuchaillotMaria Luisa Buchaillot
Maria Luisa Buchaillot
JAJosé Luis Araus
José Luis Araus
SKShawn C. Kefauver
Shawn C. Kefauver
The use of satellites to monitor crops and support their management is gathering increasing attention. The improved temporal, spatial, and spectral resolution of the European Space Agency (ESA) launched Sentinel-2 A + B twin platform is paving the way to their popularization in precision agriculture. Besides the Sentinel-2 A + B constellation technical features the open-access nature of the information they generate, and the available support software are a significant improvement for agricultural monitoring. This paper was motivated by the challenges faced by researchers and agrarian institutions entering this field; it aims to frame remote sensing principles and Sentinel-2 applications in agriculture. Thus, we reviewed the features and uses of Sentinel-2 in precision agriculture, including abiotic and biotic stress detection, and agricultural management. We also compared the panoply of satellites currently in use for land remote sensing that are relevant for agriculture to the Sentinel-2 A + B constellation features. Contrasted with previous satellite image systems, the Sentinel-2 A + B twin platform has dramatically increased the capabilities for agricultural monitoring and crop management worldwide. Regarding crop stress monitoring, Sentinel-2 capacities for abiotic and biotic stresses detection represent a great step forward in many ways though not without its limitations; therefore, combinations of field data and different remote sensing techniques may still be needed. We conclude that Sentinel-2 has a wide range of useful applications in agriculture, yet still with room for further improvements. Current and future ways that Sentinel-2 can be utilized are also discussed.

17 May 2012 in Journal of Integrative Plant Biology
Verified
Journal Article
Closed access
PDF file
LCLlorenç Cabrera‐Bosquet
Llorenç Cabrera‐Bosquet
JCJose Crossa
Jose Crossa
JZJarislav von Zitzewitz
Jarislav von Zitzewitz
MSMaría Dolors Serret
María Dolors Serret
JAJosé Luis Araus
José Luis Araus

4 August 2022 in Remote Sensing of Environment
Verified
Journal Article
Open access
KBKatja Berger
Katja Berger
MMMiriam Machwitz
Miriam Machwitz
Marlena KyckoMarlena Kycko
Marlena Kycko
SKShawn C. Kefauver
Shawn C. Kefauver
SWShari Van Wittenberghe
Shari Van Wittenberghe
MSMartin Schlerf
Martin Schlerf
Remote detection and monitoring of the vegetation responses to stress became relevant for sustainable agriculture. Ongoing developments in optical remote sensing technologies have provided tools to increase our understanding of stress-related physiological processes. Therefore, this study aimed to provide an overview of the main spectral technologies and retrieval approaches for detecting crop stress in agriculture. Firstly, we present integrated views on: i) biotic and abiotic stress factors, the phases of stress, and respective plant responses, and ii) the affected traits, appropriate spectral domains and corresponding methods for measuring traits remotely. Secondly, representative results of a systematic literature analysis are highlighted, identifying the current status and possible future trends in stress detection and monitoring. Distinct plant responses occurring under shortterm, medium-term or severe chronic stress exposure can be captured with remote sensing due to specific light interaction processes, such as absorption and scattering manifested in the reflected radiance, i.e. visible (VIS), near infrared (NIR), shortwave infrared, and emitted radiance, i.e. solar-induced fluorescence and thermal infrared (TIR). From the analysis of 96 research papers, the following trends can be observed: increasing usage of satellite and unmanned aerial vehicle data in parallel with a shift in methods from simpler parametric approaches towards more advanced physically-based and hybrid models. Most study designs were largely driven by sensor availability and practical economic reasons, leading to the common usage of VIS-NIR-TIR sensor combinations. The majority of reviewed studies compared stress proxies calculated from single-source sensor domains rather than using data in a synergistic way. We identified new ways forward as guidance for improved synergistic usage of spectral domains for stress detection: (1) combined acquisition of data from multiple sensors for analysing multiple stress responses simultaneously (holistic view); (2) simultaneous retrieval of plant traits combining multi-domain radiative transfer models and machine learning methods; (3) assimilation of estimated plant traits from distinct spectral domains into integrated crop growth models. As a future outlook, we recommend combining multiple remote sensing data streams into crop model assimilation schemes to build up Digital Twins of agroecosystems, which may provide the most efficient way to detect the diversity of environmental and biotic stresses and thus enable respective management decisions.

24 June 2015 in Plant Methods
Verified
Journal Article
Open access
PDF file
MAMainassara Zaman Allah
Mainassara Zaman Allah
OVO Vergara
O Vergara
JAJosé Luis Araus
José Luis Araus
ATA Tarekegne
A Tarekegne
CMC Magorokosho
C Magorokosho
JCJill Cairns
Jill Cairns
Recent developments in unmanned aerial platforms (UAP) have provided research opportunities in assessing land allocation and crop physiological traits, including response to abiotic and biotic stresses. UAP-based remote sensing can be used to rapidly and cost-effectively phenotype large numbers of plots and field trials in a dynamic way using time series. This is anticipated to have tremendous implications for progress in crop genetic improvement. We present the use of a UAP equipped with sensors for multispectral imaging in spatial field variability assessment and phenotyping for low-nitrogen (low-N) stress tolerance in maize. Multispectral aerial images were used to (1) characterize experimental fields for spatial soil-nitrogen variability and (2) derive indices for crop performance under low-N stress. Overall, results showed that the aerial platform enables to effectively characterize spatial field variation and assess crop performance under low-N stress. The Normalized Difference Vegetation Index (NDVI) data derived from spectral imaging presented a strong correlation with ground-measured NDVI, crop senescence index and grain yield. This work suggests that the aerial sensing platform designed for phenotyping studies has the potential to effectively assist in crop genetic improvement against abiotic stresses like low-N provided that sensors have enough resolution for plot level data collection. Limitations and future potential uses are also discussed.