Denis Baranenko

Dr. Denis Baranenko

International Research Centre “Biotechnologies of the Third Millennium”, Faculty of Biotechnologies (BioTech), ITMO University, Saint-Petersburg, Russia
orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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13 June 2024 in Frontiers in Plant Science
Verified
Journal Article
Open access
PDF file
WEWael Mohamed Elmessery
Wael Mohamed Elmessery
DMDanil V. Maklakov
Danil V. Maklakov
TETamer El-Messery
Tamer El-Messery
Denis BaranenkoDenis Baranenko
Denis Baranenko
JGJoaquín Gutiérrez
Joaquín Gutiérrez
AEAbdallah E. Elwakeel
Abdallah E. Elwakeel
Introduction: Precise semantic segmentation of microbial alterations is paramount for their evaluation and treatment. This study focuses on harnessing the SegFormer segmentation model for precise semantic segmentation of strawberry diseases, aiming to improve disease detection accuracy under natural acquisition conditions.Methods: Three distinct Mix Transformer encoders - MiT-B0, MiT-B3, and MiT-B5 - were thoroughly analyzed to enhance disease detection, targeting diseases such as Angular leaf spot, Anthracnose rot, Blossom blight, Gray mold, Leaf spot, Powdery mildew on fruit, and Powdery mildew on leaves. The dataset consisted of 2,450 raw images, expanded to 4,574 augmented images. The Segment Anything Model integrated into the Roboflow annotation tool facilitated efficient annotation and dataset preparation.Results: The results reveal that MiT-B0 demonstrates balanced but slightly overfitting behavior, MiT-B3 adapts rapidly with consistent training and validation performance, and MiT-B5 offers efficient learning with occasional fluctuations, providing robust performance. MiT-B3 and MiT-B5 consistently outperformed MiT-B0 across disease types, with MiT-B5 achieving the most precise segmentation in general.Discussion: The findings provide key insights for researchers to select the most suitable encoder for disease detection applications, propelling the field forward for further investigation. The success in strawberry disease analysis suggests potential for extending this approach to other crops and diseases, paving the way for future research and interdisciplinary collaboration.

1 July 2019 in International Journal of Biological Macromolecules
Verified
Journal Article
Closed access
XGXin Gao
Xin Gao
HQHang Qu
Hang Qu
ZGZengle Gao
Zengle Gao
DZDeyong Zeng
Deyong Zeng
JWJiaping Wang
Jiaping Wang
Wei-hong LuWei-hong Lu
Wei-hong Lu

14 December 2023 in Foods
Verified
Journal Article
Open access
PDF file
MMMariam Muradova
Mariam Muradova
APAlena Proskura
Alena Proskura
FCFrancis Canon
Francis Canon
IAIrina Aleksandrova
Irina Aleksandrova
MSMathieu Schwartz
Mathieu Schwartz
FNFABRICE NEIERS
FABRICE NEIERS
Aroma is among of the most important criteria that indicate the quality of food and beverage products. Aroma compounds can be found as free molecules or glycosides. Notably, a significant portion of aroma precursors accumulates in numerous food products as nonvolatile and flavorless glycoconjugates, termed glycosidic aroma precursors. When subjected to enzymatic hydrolysis, these seemingly inert, nonvolatile glycosides undergo transformation into fragrant volatiles or volatiles that can generate odor-active compounds during food processing. In this context, microbial β-glucosidases play a pivotal role in enhancing or compromising the development of flavors during food and beverage processing. β-glucosidases derived from bacteria and yeast can be utilized to modulate the concentration of particular aroma and taste compounds, such as bitterness, which can be decreased through hydrolysis by glycosidases. Furthermore, oral microbiota can influence flavor perception by releasing volatile compounds that can enhance or alter the perception of food products. In this review, considering the glycosidic flavor precursors present in diverse food and beverage products, we underscore the significance of glycosidases with various origins. Subsequently, we delve into emerging insights regarding the release of aroma within the human oral cavity due to the activity of oral microbial glycosidases.

24 May 2019 in Journal of Cancer Research and Clinical Oncology
Verified
Journal Article
Closed access
PDF file
MSMarek Samec
Marek Samec
ALAlena Liskova
Alena Liskova
Peter KubatkaPeter Kubatka
Peter Kubatka
SUSona Uramova
Sona Uramova
Pavol ZuborPavol Zubor
Pavol Zubor
Dietrich BüsselbergDietrich Büsselberg
Dietrich Büsselberg

22 March 2019 in Journal of Cancer Research and Clinical Oncology
Verified
Journal Article
Closed access
PDF file
AKAndrea Kapinova
Andrea Kapinova
Peter KubatkaPeter Kubatka
Peter Kubatka
ALAlena Liskova
Alena Liskova
Denis BaranenkoDenis Baranenko
Denis Baranenko
Peter KruzliakPeter Kruzliak
Peter Kruzliak
JDJan Danko
Jan Danko

26 August 2022 in Food Bioscience
Verified
Journal Article
Closed access
NTNikita Tyutkov
Nikita Tyutkov
AZAnastasia Zhernyakova
Anastasia Zhernyakova
ABArtyom Birchenko
Artyom Birchenko
EEElmira Eminova
Elmira Eminova
LNLiudmila Nadtochii
Liudmila Nadtochii
Denis BaranenkoDenis Baranenko
Denis Baranenko