Marc Jason Pomeroy

Mr. Marc Jason Pomeroy

orcid

Research Focus & Metrics

Academic Career Length

8Years (2019-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
25 January 2022 in Sensors
Verified
Journal Article
Open access
PDF file
WCWeiguo Cao
Weiguo Cao
MPMarc Jason Pomeroy
Marc Jason Pomeroy
SZShu Zhang
Shu Zhang
JTJiaxing Tan
Jiaxing Tan
ZLZhengrong Liang
Zhengrong Liang
PPPerry J. Pickhardt
Perry J. Pickhardt
Objective: As an effective lesion heterogeneity depiction, texture information extracted from computed tomography has become increasingly important in polyp classification. However, variation and redundancy among multiple texture descriptors render a challenging task of integrating them into a general characterization. Considering these two problems, this work proposes an adaptive learning model to integrate multi-scale texture features. Methods: To mitigate feature variation, the whole feature set is geometrically split into several independent subsets that are ranked by a learning evaluation measure after preliminary classifications. To reduce feature redundancy, a bottom-up hierarchical learning framework is proposed to ensure monotonic increase of classification performance while integrating these ranked sets selectively. Two types of classifiers, traditional (random forest + support vector machine)- and convolutional neural network (CNN)-based, are employed to perform the polyp classification under the proposed framework with extended Haralick measures and gray-level co-occurrence matrix (GLCM) as inputs, respectively. Experimental results are based on a retrospective dataset of 63 polyp masses (defined as greater than 3 cm in largest diameter), including 32 adenocarcinomas and 31 benign adenomas, from adult patients undergoing first-time computed tomography colonography and who had corresponding histopathology of the detected masses. Results: We evaluate the performance of the proposed models by the area under the curve (AUC) of the receiver operating characteristic curve. The proposed models show encouraging performances of an AUC score of 0.925 with the traditional classification method and an AUC score of 0.902 with CNN. The proposed adaptive learning framework significantly outperforms nine well-established classification methods, including six traditional methods and three deep learning ones with a large margin. Conclusions: The proposed adaptive learning model can combat the challenges of feature variation through a multiscale grouping of feature inputs, and the feature redundancy through a hierarchal sorting of these feature groups. The improved classification performance against comparative models demonstrated the feasibility and utility of this adaptive learning procedure for feature integration.

31 January 2023 in IEEE Transactions on Medical Imaging
Verified
Journal Article
Closed access
SCShaojie Chang
Shaojie Chang
YGYongfeng Gao
Yongfeng Gao
MPMarc Jason Pomeroy
Marc Jason Pomeroy
TBTi Bai
Ti Bai
HZHao Zhang
Hao Zhang
ZLZhengrong Liang
Zhengrong Liang
In this study, we proposed a computer-aided diagnosis (CADx) framework under dual-energy spectral CT (DECT), which operates directly on the transmission data in the pre-log domain, called CADxDE, to explore the spectral information for lesion diagnosis. The CADxDE includes material identification and machine learning (ML) based CADx. Benefits from DECT’s capability of performing virtual monoenergetic imaging with the identified materials, the responses of different tissue types (e.g., muscle, water, and fat) in lesions at each energy can be explored by ML for CADx. Without losing essential factors in the DECT scan, a pre-log domain model-based iterative reconstruction is adopted to obtain decomposed material images, which are then used to generate the virtual monoenergetic images (VMIs) at selected ${n}$ energies. While these VMIs have the same anatomy, their contrast distribution patterns contain rich information along with the ${n}$ energies for tissue characterization. Thus, a corresponding ML-based CADx is developed to exploit the energy-enhanced tissue features for differentiating malignant from benign lesions. Specifically, an original image-driven multi-channel three-dimensional convolutional neural network (CNN) and extracted lesion feature-based ML CADx methods are developed to show the feasibility of CADxDE. Results from three pathologically proven clinical datasets showed 4.01% to 14.25% higher AUC (area under the receiver operating characteristic curve) scores than the scores of both the conventional DECT data (high and low energy spectrum separately) and the conventional CT data. The mean gain >9.13% in AUC scores indicated that the energy spectral-enhanced tissue features from CADxDE have great potential to improve lesion diagnosis performance.

27 December 2019 in Journal of Medical Imaging
Verified
Journal Article
Closed access
PDF file
WCWeiguo Cao
Weiguo Cao
ZLZhengrong Liang
Zhengrong Liang
MPMarc Jason Pomeroy
Marc Jason Pomeroy
KNKenneth Ng
Kenneth Ng
SZShu Zhang
Shu Zhang
HLHongbing Lu
Hongbing Lu
<!-- *** Custom HTML *** --> Polyp classification is a feature selection and clustering process. Picking the most effective features from multiple polyp descriptors without redundant information is a great challenge in this procedure. We propose a multilayer feature selection method to construct an optimized descriptor for polyp classification with a feature-grouping strategy in a hierarchical framework. First, the proposed method makes good use of image metrics, such as intensity, gradient, and curvature, to divide their corresponding polyp descriptors into several feature groups, which are the preliminary units of this method. Then each preliminary unit generates two ranked descriptors, i.e., their optimized variable groups (OVGs) and preliminary classification measurements. Next, a feature dividing-merging (FDM) algorithm is designed to perform feature merging operation hierarchically and iteratively. Unlike traditional feature selection methods, the proposed FDM algorithm includes two steps for feature dividing and feature merging. At each layer, feature dividing selects the OVG with the highest area under the receiver operating characteristic curve (AUC) as the baseline while other descriptors are treated as its complements. In the fusion step, the FDM merges some variables with gains into the baseline from the complementary descriptors iteratively on every layer until the final descriptor is obtained. This proposed model (including the forward step algorithm and the FDM algorithm) is a greedy method that guarantees clustering monotonicity of all OVGs from the bottom to the top layer. In our experiments, all the selected results from each layer are reported by both graphical illustration and data analysis. Performance of the proposed method is compared to five existing classification methods by a polyp database of 63 samples with pathological reports. The experimental results show that our proposed method outperforms other methods by 4% to 23% gains in terms of AUC scores.

1 July 2024 in Journal of Medical Imaging
Verified
Journal Article
Closed access
DLDaniel D. Liang
Daniel D. Liang
DLDavid Liang
David Liang
MPMarc Jason Pomeroy
Marc Jason Pomeroy
YGYongfeng Gao
Yongfeng Gao
LKLicheng R. Kuo
Licheng R. Kuo
Lihong LiLihong Li
Lihong Li
PurposeMedical imaging-based machine learning (ML) for computer-aided diagnosis of in vivo lesions consists of two basic components or modules of (i) feature extraction from non-invasively acquired medical images and (ii) feature classification for prediction of malignancy of lesions detected or localized in the medical images. This study investigates their individual performances for diagnosis of low-dose computed tomography (CT) screening-detected lesions of pulmonary nodules and colorectal polyps.ApproachThree feature extraction methods were investigated. One uses the mathematical descriptor of gray-level co-occurrence image texture measure to extract the Haralick image texture features (HFs). One uses the convolutional neural network (CNN) architecture to extract deep learning (DL) image abstractive features (DFs). The third one uses the interactions between lesion tissues and X-ray energy of CT to extract tissue-energy specific characteristic features (TFs). All the above three categories of extracted features were classified by the random forest (RF) classifier with comparison to the DL-CNN method, which reads the images, extracts the DFs, and classifies the DFs in an end-to-end manner. The ML diagnosis of lesions or prediction of lesion malignancy was measured by the area under the receiver operating characteristic curve (AUC). Three lesion image datasets were used. The lesions’ tissue pathological reports were used as the learning labels.ResultsExperiments on the three datasets produced AUC values of 0.724 to 0.878 for the HFs, 0.652 to 0.965 for the DFs, and 0.985 to 0.996 for the TFs, compared to the DL-CNN of 0.694 to 0.964. These experimental outcomes indicate that the RF classifier performed comparably to the DL-CNN classification module and the extraction of tissue-energy specific characteristic features dramatically improved AUC value.ConclusionsThe feature extraction module is more important than the feature classification module. Extraction of tissue-energy specific characteristic features is more important than extraction of image abstractive and characteristic features.