Sean Benson

Dr. Sean Benson

orcid

Research Focus & Metrics

Academic Career Length

15Years (2012-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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5 December 2022 in Nature Communications
Verified
Journal Article
Open access
PDF file
SPSarthak Pati
Sarthak Pati
Ujjwal BaidUjjwal Baid
Ujjwal Baid
BEBrandon Edwards
Brandon Edwards
MSMicah Sheller
Micah Sheller
SWShih-Han Wang
Shih-Han Wang
Spyridon BakasSpyridon Bakas
Spyridon Bakas
Although machine learning (ML) has shown promise across disciplines, out-of-sample generalizability is concerning. This is currently addressed by sharing multi-site data, but such centralization is challenging/infeasible to scale due to various limitations. Federated ML (FL) provides an alternative paradigm for accurate and generalizable ML, by only sharing numerical model updates. Here we present the largest FL study to-date, involving data from 71 sites across 6 continents, to generate an automatic tumor boundary detector for the rare disease of glioblastoma, reporting the largest such dataset in the literature (n = 6, 314). We demonstrate a 33% delineation improvement for the surgically targetable tumor, and 23% for the complete tumor extent, over a publicly trained model. We anticipate our study to: 1) enable more healthcare studies informed by large diverse data, ensuring meaningful results for rare diseases and underrepresented populations, 2) facilitate further analyses for glioblastoma by releasing our consensus model, and 3) demonstrate the FL effectiveness at such scale and task-complexity as a paradigm shift for multi-site collaborations, alleviating the need for data-sharing.

28 February 2019 in EPJ Techniques and Instrumentation
Verified
Journal Article
Open access
PDF file
RARoel Aaij
Roel Aaij
LALucio Anderlini
Lucio Anderlini
Sean BensonSean Benson
Sean Benson
MCMarco Cattaneo
Marco Cattaneo
PCPhilippe Charpentier
Philippe Charpentier
YZYanxi Zhang
Yanxi Zhang
Since 2015, with the restart of the LHC for its second run of data taking, the LHCb experiment has been empowered with a dedicated computing model to select and analyse calibration samples to measure the performance of the particle identification (PID) detectors and algorithms. The novel technique was developed within the framework of the innovative trigger model of the LHCb experiment, which relies on online event reconstruction for most of the datasets, reserving offline reconstruction to special physics cases. The strategy to select and process the calibration samples, which includes a dedicated data-processing scheme combining online and offline reconstruction, is discussed. The use of the calibration samples to measure the detector PID performance, and the efficiency of PID requirements across a large range of decay channels, is described. Applications of the calibration samples in data-quality monitoring and validation procedures are also detailed.

1 April 2019 in Journal of Instrumentation
Verified
Journal Article
Open access
PDF file
RAR. Aaij
R. Aaij
SAS. Akar
S. Akar
JAJ. Albrecht
J. Albrecht
MAM. Alexander
M. Alexander
AAA. Alfonso Albero
A. Alfonso Albero
YZY. Zhou
Y. Zhou

26 September 2024 in European Heart Journal
Verified
Journal Article
Closed access
PDF file
PTPhyllis M Thangaraj
Phyllis M Thangaraj
Sean BensonSean Benson
Sean Benson
EOEvangelos K Oikonomou
Evangelos K Oikonomou
FAFolkert W Asselbergs
Folkert W Asselbergs
RKRohan Khera
Rohan Khera
Digital twins, which are in silico replications of an individual and its environment, have advanced clinical decision-making and prognostication in cardiovascular medicine. The technology enables personalized simulations of clinical scenarios, prediction of disease risk, and strategies for clinical trial augmentation. Current applications of cardiovascular digital twins have integrated multi-modal data into mechanistic and statistical models to build physiologically accurate cardiac replicas to enhance disease phenotyping, enrich diagnostic workflows, and optimize procedural planning. Digital twin technology is rapidly evolving in the setting of newly available data modalities and advances in generative artificial intelligence, enabling dynamic and comprehensive simulations unique to an individual. These twins fuse physiologic, environmental, and healthcare data into machine learning and generative models to build real-time patient predictions that can model interactions with the clinical environment to accelerate personalized patient care. This review summarizes digital twins in cardiovascular medicine and their potential future applications by incorporating new personalized data modalities. It examines the technical advances in deep learning and generative artificial intelligence that broaden the scope and predictive power of digital twins. Finally, it highlights the individual and societal challenges as well as ethical considerations that are essential to realizing the future vision of incorporating cardiology digital twins into personalized cardiovascular care.

1 November 2016 in Computer Physics Communications
Verified
Journal Article
Open access
RAR. Aaij
R. Aaij
SAS. Amato
S. Amato
LAL. Anderlini
L. Anderlini
Sean BensonSean Benson
Sean Benson
MCM. Cattaneo
M. Cattaneo
MVM. Vesterinen
M. Vesterinen

1 April 2019 in Journal of Instrumentation
Verified
Journal Article
Open access
PDF file
RAR. Aaij
R. Aaij
Sean BensonSean Benson
Sean Benson
MCM. De Cian
M. De Cian
ADA. Dziurda
A. Dziurda
CFC. Fitzpatrick
C. Fitzpatrick
MVM. Vesterinen
M. Vesterinen