Jules Beekwilder

Dr. Jules Beekwilder


Research Focus & Metrics

Academic Career Length

37Years (1990-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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12 July 2013 in Science
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Journal Article
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MIM. Itkin
M. Itkin
UHU. Heinig
U. Heinig
OTOren Tzfadia
Oren Tzfadia
ABA. J. Bhide
A. J. Bhide
Balkrishna Ankush ShindeBalkrishna Ankush Shinde
Balkrishna Ankush Shinde
AAAsaph Aharoni
Asaph Aharoni
From Nasty to Tasty: Some of our favorite food crops derive from wild relatives that were distasteful or even toxic. Domestication over many years selected for variants with reduced levels of antinutritional compounds. The wild relatives remain valuable, however, for other traits such as resistance to pathogens, but their use in crop development is complicated by the continued presence of unpalatable compounds. Itkin et al. (p. 175 , published online 20 June) elucidate the metabolic pathways and genes directing synthesis of some of these antinutritionals in potato and tomato.

22 January 2013 in The Analyst
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ATAnke K. Trilling
Anke K. Trilling
JBJules Beekwilder
Jules Beekwilder
HZHan Zuilhof
Han Zuilhof
Detection elements play a key role in analyte recognition in biosensors. Therefore, detection elements with high analyte specificity and binding strength are required. While antibodies (Abs) have been increasingly used as detection elements in biosensors, a key challenge remains – the immobilization on the biosensor surface. This minireview highlights recent approaches to immobilize and study Abs on surfaces. We first introduce Ab species used as detection elements, and discuss techniques recently used to elucidate Ab orientation by determination of layer thickness or surface topology. Then, several immobilization methods will be presented: non-covalent and covalent surface attachment, yielding oriented or random coupled Abs. Finally, protein modification methods applicable for oriented Ab immobilization are reviewed with an eye to future application.

23 January 2008 in Journal of Agricultural and Food Chemistry
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Journal Article
Closed access
STSara Tulipani
Sara Tulipani
Bruno MezzettiBruno Mezzetti
Bruno Mezzetti
FCFranco Capocasa
Franco Capocasa
SBStefano Bompadre
Stefano Bompadre
JBJules Beekwilder
Jules Beekwilder
Maurizio BattinoMaurizio Battino
Maurizio Battino

1 August 2004 in Plant Physiology
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JBJules Beekwilder
Jules Beekwilder
MAMayte Alvarez-Huerta
Mayte Alvarez-Huerta
ENEvert Neef
Evert Neef
FVFrancel W.A. Verstappen
Francel W.A. Verstappen
HBHarro Bouwmeester
Harro Bouwmeester
AAAsaph Aharoni
Asaph Aharoni
Volatile esters are flavor components of the majority of fruits. The last step in their biosynthesis is catalyzed by alcohol acyltransferases (AATs), which link alcohols to acyl moieties. Full-length cDNAs putatively encoding AATs were isolated from fruit of wild strawberry (Fragaria vesca) and banana (Musa sapientum) and compared to the previously isolated SAAT gene from the cultivated strawberry (Fragaria × ananassa). The potential role of these enzymes in fruit flavor formation was assessed. To this end, recombinant enzymes were produced in Escherichia coli, and their activities were analyzed for a variety of alcohol and acyl-CoA substrates. When the results of these activity assays were compared to a phylogenetic analysis of the various members of the acyltransferase family, it was clear that substrate preference could not be predicted on the basis of sequence similarity. In addition, the substrate preference of recombinant enzymes was not necessarily reflected in the representation of esters in the corresponding fruit volatile profiles. This suggests that the specific profile of a given fruit species is to a significant extent determined by the supply of precursors. To study the in planta activity of an alcohol acyltransferase and to assess the potential for metabolic engineering of ester production, we generated transgenic petunia (Petunia hybrida) plants overexpressing the SAAT gene. While the expression of SAAT and the activity of the corresponding enzyme were readily detected in transgenic plants, the volatile profile was found to be unaltered. Feeding of isoamyl alcohol to explants of transgenic lines resulted in the emission of the corresponding acetyl ester. This confirmed that the availability of alcohol substrates is an important parameter to consider when engineering volatile ester formation in plants.

8 December 2012 in Microbial Cell Factories
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FKFrank Koopman
Frank Koopman
JBJules Beekwilder
Jules Beekwilder
BCBarbara Crimi
Barbara Crimi
AHAdele van Houwelingen
Adele van Houwelingen
RHRobert Hall
Robert Hall
JDJean-Marc Daran
Jean-Marc Daran
Background: Flavonoids comprise a large family of secondary plant metabolic intermediates that exhibit a wide variety of antioxidant and human health-related properties. Plant production of flavonoids is limited by the low productivity and the complexity of the recovered flavonoids. Thus to overcome these limitations, metabolic engineering of specific pathway in microbial systems have been envisaged to produce high quantity of a single molecules. Result: Saccharomyces cerevisiae was engineered to produce the key intermediate flavonoid, naringenin, solely from glucose. For this, specific naringenin biosynthesis genes from Arabidopsis thaliana were selected by comparative expression profiling and introduced in S. cerevisiae. The sole expression of these A. thaliana genes yielded low extracellular naringenin concentrations (<5.5 μM). To optimize naringenin titers, a yeast chassis strain was developed. Synthesis of aromatic amino acids was deregulated by alleviating feedback inhibition of 3-deoxy-d-arabinose-heptulosonate-7-phosphate synthase (Aro3, Aro4) and byproduct formation was reduced by eliminating phenylpyruvate decarboxylase (Aro10, Pdc5, Pdc6). Together with an increased copy number of the chalcone synthase gene and expression of a heterologous tyrosine ammonia lyase, these modifications resulted in a 40-fold increase of extracellular naringenin titers (to approximately 200 μM) in glucose-grown shake-flask cultures. In aerated, pH controlled batch reactors, extracellular naringenin concentrations of over 400 μM were reached. Conclusion: The results reported in this study demonstrate that S. cerevisiae is capable of de novo production of naringenin by coexpressing the naringenin production genes from A. thaliana and optimization of the flux towards the naringenin pathway. The engineered yeast naringenin production host provides a metabolic chassis for production of a wide range of flavonoids and exploration of their biological functions.

19 January 2008 in Journal of Agricultural and Food Chemistry
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Journal Article
Closed access
Esra CapanogluEsra Capanoglu
Esra Capanoglu
JBJules Beekwilder
Jules Beekwilder
DBDilek Boyacioglu
Dilek Boyacioglu
RHRobert Hall
Robert Hall
RVRic de Vos
Ric de Vos