Tom Wennekes

Dr. Tom Wennekes

orcid

Research Focus & Metrics

Academic Career Length

23Years (2004-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
19 December 2012 in Chemical Society Reviews
Verified
Journal Article
Closed access
PDF file
ABAnna Bernardi
Anna Bernardi
Jesus Jimenez-BarberoJesus Jimenez-Barbero
Jesus Jimenez-Barbero
ACAlessandro Casnati
Alessandro Casnati
Cristina De CastroCristina De Castro
Cristina De Castro
TDTamis Darbre
Tamis Darbre
AIAnne Imberty
Anne Imberty
Multivalency plays a major role in biological processes and particularly in the relationship between pathogenic microorganisms and their host that involves protein–glycan recognition. These interactions occur during the first steps of infection, for specific recognition between host and bacteria, but also at different stages of the immune response. The search for high-affinity ligands for studying such interactions involves the combination of carbohydrate head groups with different scaffolds and linkers generating multivalent glycocompounds with controlled spatial and topology parameters. By interfering with pathogen adhesion, such glycocompounds including glycopolymers, glycoclusters, glycodendrimers and glyconanoparticles have the potential to improve or replace antibiotic treatments that are now subverted by resistance. Multivalent glycoconjugates have also been used for stimulating the innate and adaptive immune systems, for example with carbohydrate-based vaccines. Bacteria present on their surfaces natural multivalent glycoconjugates such as lipopolysaccharides and S-layers that can also be exploited or targeted in anti-infectious strategies.

27 October 2009 in Angewandte Chemie International Edition
Verified
Journal Article
Closed access
PDF file
TWTom Wennekes
Tom Wennekes
RBRichard J. B. H. N. van Den Berg
Richard J. B. H. N. van Den Berg
RBRolf Boot
Rolf Boot
GMGijsbert A. van der Marel
Gijsbert A. van der Marel
HOHerman S. Overkleeft
Herman S. Overkleeft
JAJohannes M. Aerts
Johannes M. Aerts

1 May 2007 in Diabetes
Verified
Journal Article
Closed access
PDF file
JAJohannes M. Aerts
Johannes M. Aerts
RORoelof Ottenhoff
Roelof Ottenhoff
APAndrew S. Powlson
Andrew S. Powlson
AGAldo Grefhorst
Aldo Grefhorst
MEMarco Van Eijk
Marco Van Eijk
HOHermen S. Overkleeft
Hermen S. Overkleeft
A growing body of evidence implicates ceramide and/or its glycosphingolipid metabolites in the pathogenesis of insulin resistance. We have developed a highly specific small molecule inhibitor of glucosylceramide synthase, an enzyme that catalyzes a necessary step in the conversion of ceramide to glycosphingolipids. In cultured 3T3-L1 adipocytes, the iminosugar derivative N-(5′-adamantane-1′-yl-methoxy)-pentyl-1-deoxynojirimycin (AMP-DNM) counteracted tumor necrosis factor-α–induced abnormalities in glycosphingolipid concentrations and concomitantly reversed abnormalities in insulin signal transduction. When administered to mice and rats, AMP-DNM significantly reduced glycosphingolipid but not ceramide concentrations in various tissues. Treatment of ob/ob mice with AMP-DNM normalized their elevated tissue glucosylceramide levels, markedly lowered circulating glucose levels, improved oral glucose tolerance, reduced A1C, and improved insulin sensitivity in muscle and liver. Similarly beneficial metabolic effects were seen in high fat–fed mice and ZDF rats. These findings provide further evidence that glycosphingolipid metabolites of ceramide may be involved in mediating the link between obesity and insulin resistance and that interference with glycosphingolipid biosynthesis might present a novel approach to the therapy of states of impaired insulin action such as type 2 diabetes.

5 April 2013 in Science
Verified
Journal Article
Closed access
PDF file
JKJin-Hyo Kim
Jin-Hyo Kim
RRRicardo Resende
Ricardo Resende
TWTom Wennekes
Tom Wennekes
HCHong-Ming Chen
Hong-Ming Chen
NBNicole Bance
Nicole Bance
SWStephen Withers
Stephen Withers
Adding to the Antiviral Arsenal: The envelope of influenza virus contains two immunodominant glycoproteins: hemagglutinin and neuraminidase (NA). Existing antivirals like zanamivir (Relenza) and oseltamivir (Tamiflu) target NA; however, the development of drug resistance is a problem. Kim et al. (p. 71 , published online 21 February) now report a different class of NA inhibitors. NA catalyzes the removal of sialic acids from the surface of host cells to initiate entry. Discovery of a NA–sialic acid intermediate led to the production of sialic acid analogs that bound covalently to NA and inhibited its enzymatic activity. These compounds showed activity against a wide variety of influenza strains, inhibited viral replication in cell culture, and were able to protect mice against influenza infection. Protection of mice was equivalent to protection seen from zanamivir. Moreover, the compounds showed activity against drug-resistant strains in vitro. These compounds represent a potentially useful addition to the arsenal of antivirals used to treat influenza infection.

1 January 2007 in Journal of Biological Chemistry
Verified
Journal Article
Open access
RBRolf Boot
Rolf Boot
MVMarri Verhoek
Marri Verhoek
WDWilma Donker-Koopman
Wilma Donker-Koopman
ASAnneke Strijland
Anneke Strijland
JMJan van Marle
Jan van Marle
JAJohannes M. Aerts
Johannes M. Aerts
The primary catabolic pathway for glucosylceramide is catalyzed by the lysosomal enzyme glucocerebrosidase that is defective in Gaucher disease patients. A distinct non-lysosomal glucosylceramidase has been described but its identity remained enigmatic for years. We here report that the non-lysosomal glucosylceramidase is identical to the earlier described bile acid beta-glucosidase, being beta-glucosidase 2 (GBA2). Expressed GBA2 is identical to the native non-lysosomal glucosylceramidase in various enzymatic features such as substrate specificity and inhibitor sensitivity. Expression of GBA2 coincides with increased non-lysosomal glucosylceramidase activity, and GBA2-targeted RNA interference reduces endogenous non-lysosomal glucosylceramidase activity in cells. GBA2 is found to be located at or close to the cell surface, and its activity is linked to sphingomyelin generation. Hydrophobic deoxynojirimycins are extremely potent inhibitors for GBA2. In mice pharmacological inhibition of GBA2 activity is associated with impaired spermatogenesis, a phenomenon also very recently reported for GBA2 knock-out mice (Yildiz, Y., Matern, H., Thompson, B., Allegood, J. C., Warren, R. L., Ramirez, D. M., Hammer, R. E., Hamra, F. K., Matern, S., and Russell, D. W. (2006) J. Clin. Invest. 116, 2985-2994). In conclusion, GBA2 plays a role in cellular glucosylceramide metabolism.

23 January 2007 in The Journal of Organic Chemistry
Verified
Journal Article
Closed access
TWTom Wennekes
Tom Wennekes
RBRichard J. B. H. N. van Den Berg
Richard J. B. H. N. van Den Berg
WDWilma Donker
Wilma Donker
GMGijsbert A. van der Marel
Gijsbert A. van der Marel
ASAnneke Strijland
Anneke Strijland
HOHerman S. Overkleeft
Herman S. Overkleeft