Almudena Perona

Dr. Almudena Perona

orcid

Research Focus & Metrics

Academic Career Length

22Years (2005-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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27 July 2020 in Green Chemistry
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APAlmudena Perona
Almudena Perona
PHPilar Hoyos
Pilar Hoyos
MFM. Ángeles Farrán
M. Ángeles Farrán
MHMaria Hernaiz
Maria Hernaiz
Recent advances in sustainable mechanochemical transformations of carbohydrates.

2 February 2021 in Chemistry – A European Journal
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PHPilar Hoyos
Pilar Hoyos
APAlmudena Perona
Almudena Perona
OJOlga Juanes
Olga Juanes
ÁSÁngel Rumbero Sánchez
Ángel Rumbero Sánchez
MHMaria Hernaiz
Maria Hernaiz

Verified
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CGCecilia García-Oliva
Cecilia García-Oliva
APAlmudena Perona
Almudena Perona
ÁSÁngel Rumbero Sánchez
Ángel Rumbero Sánchez
PHPilar Hoyos
Pilar Hoyos
MHMaria Hernaiz
Maria Hernaiz
Rhamnolipids are becoming an important class of glycolipid biosurfactants. Herein, we describe for the first time the enzymatic synthesis of rhamnose fatty acid esters by the transesterification of rhamnose with fatty acid vinyl esters, using lipase from Pseudomonas stutzeri as a biocatalyst. The use of this lipase allows excellent catalytic activity in the synthesis of 4-O-acylrhamnose (99% conversion and full regioselectivity) after 3 h of reaction using tetrahydrofuran (THF) as the reaction media and an excess of vinyl laurate as the acyl donor. The role of reaction conditions, such as temperature, the substrates molar ratio, organic reaction medium and acyl donor chain-length, was studied. Optimum conditions were found using 35 °C, a molar ratio of 1:3 (rhamnose:acyldonor), solvents with a low logP value, and fatty acids with chain lengths from C4 to C18 as acyl donors. In hydrophilic solvents such as THF and acetone, conversions of up to 99–92% were achieved after 3 h of reaction. In a more sustainable solvent such as 2-methyl-THF (2-MeTHF), high conversions were also obtained (86%). Short and medium chain acyl donors (C4–C10) allowed maximum conversions after 3 h, and long chain acyl donors (C12–C18) required longer reactions (5 h) to get 99% conversions. Furthermore, scaled up reactions are feasible without losing catalytic action and regioselectivity. In order to explain enzyme regioselectivity and its ability to accommodate ester chains of different lengths, homology modelling, docking studies and molecular dynamic simulations were performed to explain the behaviour observed.

31 July 2019 in Organic & Biomolecular Chemistry
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JAJon del Arco
Jon del Arco
APAlmudena Perona
Almudena Perona
LGLeticia Gonzalez
Leticia Gonzalez
Jesús Fernández-LucasJesús Fernández-Lucas
Jesús Fernández-Lucas
FGFederico Gago
Federico Gago
PSPedro A. Sánchez-Murcia
Pedro A. Sánchez-Murcia
Insight into the catalytic mechanism of Lactobacillus leichmannii nucleoside 2′-deoxyribosyltransferase (LlNDT) has been gained by calculating a quantum mechanics–molecular mechanics (QM/MM) free-energy landscape of the reaction within the enzyme active site. Our results support an oxocarbenium species as the reaction intermediate and thus an SN1 reaction mechanism in this family of bacterial enzymes. Our mechanistic proposal is validated by comparing experimental kinetic data on the impact of the single amino acid replacements Tyr7, Glu98 and Met125 with Ala, Asp and Ala/norLeu, respectively, and accounts for the specificity shown by this enzyme on a non-natural substrate. This work broadens our understanding of enzymatic C–N bond cleavage and C–N bond formation.

9 August 2011 in Journal of Computer-Aided Molecular Design
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ÁCÁlvaro Cortés Cabrera
Álvaro Cortés Cabrera
RGRubén Gil-Redondo
Rubén Gil-Redondo
APAlmudena Perona
Almudena Perona
FGFederico Gago
Federico Gago
AMAntonio Morreale
Antonio Morreale

23 October 2019 in Chemistry – A European Journal
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CGCecilia García‐Oliva
Cecilia García‐Oliva
ACAlfredo H. Cabanillas
Alfredo H. Cabanillas
APAlmudena Perona
Almudena Perona
PHPilar Hoyos
Pilar Hoyos
ÁSÁngel Rumbero Sánchez
Ángel Rumbero Sánchez
MHMaria Hernaiz
Maria Hernaiz