Jeahong Shim

Dr. Jeahong Shim


Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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30 December 2021 in Fermentation
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Journal Article
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Van Hong Thi PhamVan Hong Thi Pham
Van Hong Thi Pham
Jaisoo KimJaisoo Kim
Jaisoo Kim
JSJeahong Shim
Jeahong Shim
SCSoon Woong Chang
Soon Woong Chang
woojin Chungwoojin Chung
woojin Chung
Microbial enzymes such as protease and amylase are valuable enzymes with various applications, widely investigated for their applications in degradation of organic waste, biofuel industries, agricultural, pharmaceuticals, chemistry, and biotechnology. In particular, extremophiles play an important role in biorefinery due to their novel metabolic products such as high value catalytic enzymes that are active even under harsh environmental conditions. Due to their potentials and very broad activities, this study isolated, investigated, and characterized the protease- and amylase-producing bacterial strain FW2 that was isolated from food waste. Strain FW2 belongs to the genus Bacillus and was found to be closest to Bacillus amyloliquefaciens DSM 7T with a similarity of 99.86%. This strain was able to degrade organic compounds at temperatures from −6 °C to 75 °C (but weak at 80 °C) under a wide pH range (4.5–12) and high-salinity conditions up to 35% NaCl. Maximum enzyme production was obtained at 1200 ± 23.4 U/mL for protease and 2400 ± 45.8 U/mL for amylase for 4 days at pH 7–7.5, 40–45 °C, and 0–10% NaCl. SDS-PAGE analysis showed that the molecular weights of purified protease were 28 kDa and 44 kDa, corresponding to alkaline protease (AprM) and neutral protease (NprM), respectively, and molecular weight of α-amylase was 55 kDa. Degradation food waste was determined after 15 days, observing a 69% of volume decrease. A potential commercial extremozyme-producing bacteria such as strain FW2 may be a promising contributor to waste degradation under extreme environmental conditions.

31 January 2022 in Microorganisms
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Journal Article
Open access
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Van Hong Thi PhamVan Hong Thi Pham
Van Hong Thi Pham
Jaisoo KimJaisoo Kim
Jaisoo Kim
JSJeahong Shim
Jeahong Shim
SCSoon Woong Chang
Soon Woong Chang
woojin Chungwoojin Chung
woojin Chung
Facing the crucial issue of high cost in cellulase production from commercial celluloses, inexpensive lignocellulosic materials from agricultural wastes have been attractive. Therefore, several studies have focused on increasing the efficiency of cellulase production by potential microorganisms capable of secreting a high and diversified amount of enzymes using agricultural waste as valuable substrates. Especially, extremophilic bacteria play an important role in biorefinery due to their high value catalytic enzymes that are active even under harsh environmental conditions. Therefore, in this study, we aim to investigate the ability to produce cellulase from coconut-mesocarp of the potential bacterial strain FW2 that was isolated from kitchen food waste in South Korea. This strain was tolerant in a wide range of temperature (−6–75 °C, pH range (4.5–12)) and at high salt concentration up to 35% NaCl. The molecular weight of the purified cellulase produced from strain FW2 was estimated to be 55 kDa. Optimal conditions for the enzyme activity using commercial substrates were found to be 40–50 °C, pH 7.0–7.5, and 0–10% NaCl observed in 920 U/mL of CMCase, 1300 U/mL of Avicelase, and 150 U/mL of FPase. It was achieved in 650 U/mL, 720 U/mL, and 140 U/mL of CMCase, Avicelase, and FPase using coconut-mesocarp, respectively. The results revealed that enzyme production by strain FW2 may have significant commercial values for industry, argo-waste treatment, and other potential applications.

22 December 2022 in Agronomy
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Journal Article
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woojin Chungwoojin Chung
woojin Chung
JSJeahong Shim
Jeahong Shim
SCSoon Woong Chang
Soon Woong Chang
Ravindran BalasubramaniRavindran Balasubramani
Ravindran Balasubramani
The global increase in population will result in increased global food production which can, in turn, lead to excessive food waste. Although composting is widely adopted for the conversion of organic waste into value-added products, there are several limitations, such as its lower efficiency in composting food waste without co-composting, the loss of nutrients, and the emission of greenhouse gases. Due to its renowned characteristics, biochar amendments are used during composting to overcome these issues; each waste should be at an appropriate level to yield good quality compost with high nutrient levels. In this study, we co-composted food waste with chicken and swine manure with varying proportions in the presence and absence of biochar to identify the ideal proportion of each raw material and the biochar. Physicochemical parameters such as pH, EC, temperature, bulk density, porosity, C:N ratio, and gaseous emissions were analyzed. The results showed that the desired quality of compost was obtained in the treatment with 5% biochar with 40%, 20%, and 20% of food waste, chicken manure, and swine manure, respectively, and 15% sawdust.

31 July 2023 in Microorganisms
Verified
Journal Article
Open access
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Van Hong Thi PhamVan Hong Thi Pham
Van Hong Thi Pham
Jaisoo KimJaisoo Kim
Jaisoo Kim
SCSoon Woong Chang
Soon Woong Chang
JSJeahong Shim
Jeahong Shim
woojin Chungwoojin Chung
woojin Chung
DBDonggyu Bang
Donggyu Bang
The brightly colored synthetic dyes used in the textile industry are discharged at high concentrations—for example, various azo dyes including Methylene Blue (MB) and Methyl Orange (MO)—which is a matter of global concern, as such dyes are harmful to humans and the environment. Microbial degradation is considered an efficient alternative for overcoming the disadvantages of conventional physical and chemical dye removal methods. In this study, we investigated the potential of multiple types of the enzyme-producing extremophilic bacteria Bacillus FW2, isolated from food waste leachate, for the decolorization and bioremediation of artificial synthetic dyes. The screening of enzyme production and assaying of bacterial strain enzymes are essential for enhancing the breakdown of azo bonds in textile azo dyes. The degradation efficiencies of the water-soluble dyes MB and MO were determined at different concentrations using rice husk, which is an efficient substrate. Using the rice husks, the MO was removed completely within 20 h, and an estimated 99.8% of MB was degraded after 24 h by employing shaking at 120 rpm at 40 °C—whereas a removal efficiency of 98.9% was achieved for the combination of MB + MO. These results indicate the possibility of applying an extremophilic bacterial strain, Bacillus sp., for large-scale dye degradation in the future.

17 December 2025 in Applied Sciences
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GVGovind Vyavahare
Govind Vyavahare
JYJin-Ju Yun
Jin-Ju Yun
JPJae-Hyuk Park
Jae-Hyuk Park
JSJeahong Shim
Jeahong Shim
SKSeong Heon Kim
Seong Heon Kim
SJSangho Jeon
Sangho Jeon
Soil analysis is fundamental to sustainable agriculture; however, traditional laboratory methods are time-consuming, expensive, and environmentally hazardous. Spectroscopy techniques, particularly Near-Infrared (NIR), have gained considerable attention because they require minimal sample preparation, no chemicals, and predict multiple soil properties with a single scan. However, selecting appropriate equipment remains critical, as previous studies have reported inconsistent performance between conventional Near-Infrared (NIR) spectroscopy and advanced Fourier-Transform Near-Infrared (FT-NIR) spectroscopy. Therefore, this study aimed to compare the predictive performance of conventional NIR and advanced FT-NIR spectroscopy for sixteen soil properties. Soil samples (n = 567) were collected from different land-use types across South Korea at a depth of 0–20 cm and analyzed using laboratory methods and spectroscopy techniques. Five models, including partial least squares regression (PLSR), Cubist, support vector machine (SVM), random forest (RF), and memory-based learning (MBL), were evaluated using 15-fold cross-validation to assess prediction accuracy. Overall, conventional NIR spectroscopy yielded consistently higher accuracy for all soil properties than FT-NIR. Strong predictive accuracy was achieved for EC (R2 = 0.84), OM (R2 = 0.84), avl. P (R2 = 0.77), TN (R2 = 0.84), and CEC (R2 = 0.76). In contrast, FT-NIR provided good prediction accuracy only for Ex. K (R2 = 0.72) and TN (R2 = 0.84). The average performance of NIR (R2 = 0.67) outperformed FT-NIR spectroscopy (R2 = 0.63) across all soil properties. These findings demonstrate that, despite their lower spectral resolution, NIR spectra provide robust predictive capability across a wide range of soil properties, which can significantly reduce the investment cost of advanced equipment such as FT-NIR for routine soil analysis.

28 February 2025 in Korean Journal of Soil Science and Fertilizer
Verified
Journal Article
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SKSin-Sil Kim
Sin-Sil Kim
YLYu-Na Lee
Yu-Na Lee
DLDong Won Lee
Dong Won Lee
JSJeahong Shim
Jeahong Shim
SJSangho Jeon
Sangho Jeon
SKSeong Heon Kim
Seong Heon Kim
Soil organic carbon (SOC) can be accumulated through various organic inputs such as organic fertilizers, compost, and biochar. While organic fertilizers are effective in supplying nutrients, they have limitations in stable carbon sequestration compared to biochar. Therefore, this study aimed to determine the optimal mixing ratio of organic fertilizer and biochar that can supply nutrients while ensuring sustained and stable carbon sequestration. The growth of lettuce, soil chemical properties, and soil carbon sequestration were evaluated through a pot experiment based on the mixing ratios of organic fertilizer and biochar derived from agricultural waste. The treatments in the pot experiment included no fertilizer (NF), inorganic fertilizer (IF), and biochar mixed organic fertilizer (BAOF), mixing ratios of organic fertilizer:biochar = 100:0, 90:10, 80:20, 70:30. The results showed that leaf length and width of lettuce increased by 1.70-1.84 and 1.58-1.78 times, respectively, in BAOF treatments compared to NF. The highest yield was observed in BAOF (100:0). The organic matter content increased with higher mixing ratio of biochar. SOC stock was observed in the following order: 11.93 (BAOF70:30) > 11.22 (BAOF80:20) > 10.35 (BAOF90:10) > 10.26 (BAOF100:0) t C ha-1. In conclusion, mixing biochar with organic fertilizers promoted lettuce growth and led to increased soil carbon sequestration. These results indicated that the optimal mixing ratio was determined to be BAOF70:30.