Joao Leote

Prof. Dr. Joao Leote

orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2016 in Clinical Neurophysiology Practice
Verified
Journal Article
Open access
JVJosep Valls-Sole
Josep Valls-Sole
JLJoao Leote
Joao Leote
PPPedro Pereira
Pedro Pereira
Median sensory nerve conduction studies are arguably the most often performed electrodiagnostic tests worldwide. Routine tests in clinical practice are done using either antidromic or orthodromic techniques type of stimulation, with no universal agreement on the use of one or the other technique. We review the advantages and drawbacks of antidromic and orthodromic as well as their particularities for clinical application and research. The two techniques differ on how physical and physiological changes affect the action potential. Near-nerve recording is better suited for the orthodromic than for the antidromic technique, while studies of nerve excitability are better suited for the antidromic than for the orthodromic technique. Both techniques are equally suitable for routine tests but research studies may specifically demand one or the other.

10 October 2023 in Journal of Imaging
Verified
Journal Article
Open access
PDF file
DSDuarte Saraiva
Duarte Saraiva
João MendesJoão Mendes
João Mendes
JLJoao Leote
Joao Leote
Filipe André GonzalezFilipe André Gonzalez
Filipe André Gonzalez
Nuno M. GarciaNuno M. Garcia
Nuno M. Garcia
Nuno MatelaNuno Matela
Nuno Matela
Ultrasound (US) imaging is used in the diagnosis and monitoring of COVID-19 and breast cancer. The presence of Speckle Noise (SN) is a downside to its usage since it decreases lesion conspicuity. Filters can be used to remove SN, but they involve time-consuming computation and parameter tuning. Several researchers have been developing complex Deep Learning (DL) models (150,000–500,000 parameters) for the removal of simulated added SN, without focusing on the real-world application of removing naturally occurring SN from original US images. Here, a simpler (<30,000 parameters) Convolutional Neural Network Autoencoder (CNN-AE) to remove SN from US images of the breast and lung is proposed. In order to do so, simulated SN was added to such US images, considering four different noise levels (σ = 0.05, 0.1, 0.2, 0.5). The original US images (N = 1227, breast + lung) were given as targets, while the noised US images served as the input. The Structural Similarity Index Measure (SSIM) and Peak Signal-to-Noise Ratio (PSNR) were used to compare the output of the CNN-AE and of the Median and Lee filters with the original US images. The CNN-AE outperformed the use of these classic filters for every noise level. To see how well the model removed naturally occurring SN from the original US images and to test its real-world applicability, a CNN model that differentiates malignant from benign breast lesions was developed. Several inputs were used to train the model (original, CNN-AE denoised, filter denoised, and noised US images). The use of the original US images resulted in the highest Matthews Correlation Coefficient (MCC) and accuracy values, while for sensitivity and negative predicted values, the CNN-AE-denoised US images (for higher σ values) achieved the best results. Our results demonstrate that the application of a simpler DL model for SN removal results in fewer misclassifications of malignant breast lesions in comparison to the use of original US images and the application of the Median filter. This shows that the use of a less-complex model and the focus on clinical practice applicability are relevant and should be considered in future studies.

1 January 2018 in European Journal of Radiology Open
Verified
Journal Article
Open access
JLJoao Leote
Joao Leote
RNRita G. Nunes
Rita G. Nunes
LCLuis Cerqueira
Luis Cerqueira
RLRicardo Loução
Ricardo Loução
HFHugo Alexandre Ferreira
Hugo Alexandre Ferreira
Tractography studies for pre-surgical planning of primary brain tumors is typically done using diffusion tensor imaging (DTI), which cannot resolve crossing, kissing or highly angulated fibres. Tractography based on the estimation of the diffusion kurtosis (DK) tensor was recently demonstrated to enable tackling these limitations. However, its use in the clinical context at low 1.5T field has not yet been reported. To evaluate if the estimation of whole-brain tractography using the DK tensor is feasible for pre-surgical investigation of patients with brain tumors at 1.5T. Eight healthy subjects and 3 patients with brain tumors were scanned at 1.5T using a 12-channel head coil. Diffusion-weighted images were acquired with repetition/echo times of 5800/107 ms, 82 × 82 resolution, 3 × 3 × 3 mm3 voxel size, b-values of 0, 1000, 2000 s/mm2 and 64 gradient sensitising directions. Whole-brain tractography was estimated using the DK tensor and corticospinal tracts (CST) were isolated using regions-of-interest placed at the cerebral peduncles and motor gyrus. Tract size, DK metrics and CST deviation index (highest curvature point) were compared between healthy subjects and patients. Tract sizes did not differ between groups. The CST deviation index was significantly higher in patients compared to healthy subjects. Fractional anisotropy was significantly lower in patients, with higher mean kurtosis asymmetry index at the highest curvature point in patients. Corticospinal fibre bundles estimated using DK tensor in a 1.5T scanner presented similar properties in patients with brain gliomas as those reported in the literature using DTI-based tractography.

7 July 2022 in The Ultrasound Journal
Verified
Journal Article
Open access
PDF file
JLJoao Leote
Joao Leote
TJTiago Judas
Tiago Judas
ABAna Luísa Broa
Ana Luísa Broa
MLMiguel Lopes
Miguel Lopes
FAFrancisca Abecasis
Francisca Abecasis
FGFilipe Gonzalez
Filipe Gonzalez
Background: Lung ultrasound (LUS) is a valuable tool to predict and monitor the COVID-19 pneumonia course. However, the influence of cardiac dysfunction (CD) on LUS findings remains to be studied. Our objective was to determine the effect of CD on LUS in hospitalized patients with COVID-19 pneumonia. Material and methods: Fifty-one patients with COVID-19 pneumonia participated in the study. Focused echocardiography (FoCUS) was carried out on day 1 to separate patients into two groups depending on whether they had FoCUS signs of CD (CD+ vs CD−). LUS scores, based on the thickness of the pleural line, the B-line characteristics, and the presence or not of consolidations, were obtained three times along the patient’s admission (D1, D5, D10) and compared between CD+ and CD− patients. A correlation analysis was carried out between LUS scores and the ratio of the arterial partial pressure of oxygen to the fraction of the inspired oxygen (P/F ratio). Results: Twenty-two patients were CD+ and 29 patients were CD−. Among the CD+ patients, 19 were admitted to the intensive care unit (ICU), seven received invasive mechanical ventilation (IMV), and one did not survive. Among the CD− patients, 11 were admitted to the ICU, one received IMV and seven did not survive. CD+ patients showed a significantly lower P/F ratio than CD− patients. However, LUS scores showed no between-group differences, except for fewer subpleural consolidations in the upper quadrants of CD+ than on CD− patients. Conclusion: In patients with COVID-19, CD contributed to a worse clinical course, but it did not induce significant changes in LUS. Our findings suggest that pathophysiological factors other than those reflected by LUS may be responsible for the differences in clinical condition between CD+ and CD− patients.

6 May 2023 in Ultrasound in Medicine & Biology
Verified
Journal Article
Open access
JLJoao Leote
Joao Leote
TMTiago Muxagata
Tiago Muxagata
DGDiana Guerreiro
Diana Guerreiro
CFCláudia Francisco
Cláudia Francisco
HDHermínia Dias
Hermínia Dias
FGFilipe Gonzalez
Filipe Gonzalez
The aim of the work described here was to analyze the relationship between the change in ultrasound (US) settings and the vertical artifacts' number, visual rating and signal intensity METHODS: An in vitro phantom consisting of a damp sponge and gelatin mix was created to simulate vertical artifacts. Furthermore, several US parameters were changed sequentially (i.e., frequency, dynamic range, line density, gain, power and image enhancement) and after image acquisition. Five US experts rated the artifacts for number and quality. In addition, a vertical artifact visual score was created to determine the higher artifact rating ("optimal") and the lower artifact rating ("suboptimal"). Comparisons were made between the tested US parameters and baseline recordings. The expert intraclass correlation coefficient for the number of vertical artifacts was 0.694. The parameters had little effect on the "optimal" vertical artifacts but changed their number. Dynamic range increased the number of discernible vertical artifacts to 3 from 36 to 102 dB. The intensity did not correlate with the visual rating score. Most of the available US parameters did not influence vertical artifacts.

6 April 2023 in British Journal of Anaesthesia
Verified
Journal Article
Closed access
JBJacobo Bacariza
Jacobo Bacariza
Filipe André GonzalezFilipe André Gonzalez
Filipe André Gonzalez
RVRita Varudo
Rita Varudo
JLJoao Leote
Joao Leote
CMCristina Martins
Cristina Martins
FMFrederic Michard
Frederic Michard