Jian Zheng

Dr. Jian Zheng

orcid

Research Focus & Metrics

Academic Career Length

28Years (1999-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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5 January 2017 in BioMedical Engineering OnLine
Verified
Journal Article
Open access
PDF file
CPChengtao Peng
Chengtao Peng
BQBensheng Qiu
Bensheng Qiu
MLMing Li
Ming Li
YGYihui Guan
Yihui Guan
CZCheng Zhang
Cheng Zhang
JZJian Zheng
Jian Zheng
Metal objects implanted in the bodies of patients usually generate severe streaking artifacts in reconstructed images of X-ray computed tomography, which degrade the image quality and affect the diagnosis of disease. Therefore, it is essential to reduce these artifacts to meet the clinical demands. In this work, we propose a Gaussian diffusion sinogram inpainting metal artifact reduction algorithm based on prior images to reduce these artifacts for fan-beam computed tomography reconstruction. In this algorithm, prior information that originated from a tissue-classified prior image is used for the inpainting of metal-corrupted projections, and it is incorporated into a Gaussian diffusion function. The prior knowledge is particularly designed to locate the diffusion position and improve the sparsity of the subtraction sinogram, which is obtained by subtracting the prior sinogram of the metal regions from the original sinogram. The sinogram inpainting algorithm is implemented through an approach of diffusing prior energy and is then solved by gradient descent. The performance of the proposed metal artifact reduction algorithm is compared with two conventional metal artifact reduction algorithms, namely the interpolation metal artifact reduction algorithm and normalized metal artifact reduction algorithm. The experimental datasets used included both simulated and clinical datasets. By evaluating the results subjectively, the proposed metal artifact reduction algorithm causes fewer secondary artifacts than the two conventional metal artifact reduction algorithms, which lead to severe secondary artifacts resulting from impertinent interpolation and normalization. Additionally, the objective evaluation shows the proposed approach has the smallest normalized mean absolute deviation and the highest signal-to-noise ratio, indicating that the proposed method has produced the image with the best quality. No matter for the simulated datasets or the clinical datasets, the proposed algorithm has reduced the metal artifacts apparently.

14 March 2022 in IEEE Transactions on Neural Networks and Learning Systems
Verified
Journal Article
Closed access
YCYuzhong Chen
Yuzhong Chen
JYJiadong Yan
Jiadong Yan
MJMingxin Jiang
Mingxin Jiang
TZTuo Zhang
Tuo Zhang
ZZZhongbo Zhao
Zhongbo Zhao
XJXi Jiang
Xi Jiang
Graph neural networks (GNNs) have received increasing interest in the medical imaging field given their powerful graph embedding ability to characterize the non-Euclidean structure of brain networks based on magnetic resonance imaging (MRI) data. However, previous studies are largely node-centralized and ignore edge features for graph classification tasks, resulting in moderate performance of graph classification accuracy. Moreover, the generalizability of GNN model is still far from satisfactory in brain disorder [e.g., autism spectrum disorder (ASD)] identification due to considerable individual differences in symptoms among patients as well as data heterogeneity among different sites. In order to address the above limitations, this study proposes a novel adversarial learning-based node-edge graph attention network (AL-NEGAT) for ASD identification based on multimodal MRI data. First, both node and edge features are modeled based on structural and functional MRI data to leverage complementary brain information and preserved in the constructed weighted adjacent matrix for individuals through the attention mechanism in the proposed NEGAT. Second, two AL methods are employed to improve the generalizability of NEGAT. Finally, a gradient-based saliency map strategy is utilized for model interpretation to identify important brain regions and connections contributing to the classification. Experimental results based on the public Autism Brain Imaging Data Exchange I (ABIDE I) data demonstrate that the proposed framework achieves a classification accuracy of 74.7% between ASD and typical developing (TD) groups based on 1007 subjects across 17 different sites and outperforms the state-of-the-art methods, indicating satisfying classification ability and generalizability of the proposed AL-NEGAT model. Our work provides a powerful tool for brain disorder identification.

30 March 2022 in IEEE Journal of Biomedical and Health Informatics
Verified
Journal Article
Closed access
WCWeiwei Cao
Weiwei Cao
GYGang Yuan
Gang Yuan
QLQi Liu
Qi Liu
CPChengtao Peng
Chengtao Peng
JXJing Xie
Jing Xie
JZJian Zheng
Jian Zheng
Skin lesion segmentation is a fundamental procedure in computer-aided melanoma diagnosis. However, due to the diverse shape, variable size, blurry boundary, and noise interference of lesion regions, existing methods may struggle with the challenge of inconsistency within classes and indiscrimination between classes. In view of this, we propose a novel method to learn and model inter-pixel correlations from both global and local aspects, which can increase inter-class variances and intra-class similarities. Specifically, under the encoder-decoder architecture, we first design a pyramid transformer inter-pixel correlations (PTIC) module, aiming at capturing the non-local context information of different levels and further exploring the global pixel-level relationship to deal with the large variance of shape and size. Further, we devise a local neighborhood metric learning (LNML) module to strengthen the local semantic correlations learning capability and increase the separability between classes in the feature space. These two modules can complementarily strengthen the feature representation capability via exploiting the inter-pixel semantic correlations, thus further improving intra-class consistency and inter-class variance. Comprehensive experiments are performed on public skin lesion segmentation datasets: ISIC 2018, ISIC2016, and PH2, and experimental results demonstrate that the proposed method achieves better segmentation performance than other state-of-the-art methods.

10 February 2021 in European Radiology
Verified
Journal Article
Closed access
PDF file
XZXiang Zhang
Xiang Zhang
ZYZehong Yang
Zehong Yang
WCWenju Cui
Wenju Cui
CZChushan Zheng
Chushan Zheng
HLHaojiang Li
Haojiang Li
JSJun Shen
Jun Shen

24 March 2023 in IEEE Transactions on Medical Imaging
Verified
Journal Article
Closed access
MLMing Li
Ming Li
JWJiping Wang
Jiping Wang
YCYang Chen
Yang Chen
YTYufei Tang
Yufei Tang
ZWZhongyi Wu
Zhongyi Wu
BTBenjamin M. W. Tsui
Benjamin M. W. Tsui
Deep learning (DL) based image processing methods have been successfully applied to low-dose x-ray images based on the assumption that the feature distribution of the training data is consistent with that of the test data. However, low-dose computed tomography (LDCT) images from different commercial scanners may contain different amounts and types of image noise, violating this assumption. Moreover, in the application of DL based image processing methods to LDCT, the feature distributions of LDCT images from simulation and clinical CT examination can be quite different. Therefore, the network models trained with simulated image data or LDCT images from one specific scanner may not work well for another CT scanner and image processing task. To solve such domain adaptation problem, in this study, a novel generative adversarial network (GAN) with noise encoding transfer learning (NETL), or GAN-NETL, is proposed to generate a paired dataset with a different noise style. Specifically, we proposed a method to perform noise encoding operator and incorporate it into the generator to extract a noise style. Meanwhile, with a transfer learning (TL) approach, the image noise encoding operator transformed the noise type of the source domain to that of the target domain for realistic noise generation. One public and two private datasets are used to evaluate the proposed method. Experiment results demonstrated the feasibility and effectiveness of our proposed GAN-NETL model in LDCT image synthesis. In addition, we conduct additional image denoising study using the synthesized clinical LDCT data, which verified the merit of the proposed synthesis in improving the performance of the DL based LDCT processing method.

18 June 2016 in BioMedical Engineering OnLine
Verified
Journal Article
Open access
PDF file
CZCheng Zhang
Cheng Zhang
TZTao Zhang
Tao Zhang
MLMing Li
Ming Li
CPChengtao Peng
Chengtao Peng
ZLZhaobang Liu
Zhaobang Liu
JZJian Zheng
Jian Zheng
In order to reduce the radiation dose of CT (computed tomography), compressed sensing theory has been a hot topic since it provides the possibility of a high quality recovery from the sparse sampling data. Recently, the algorithm based on DL (dictionary learning) was developed to deal with the sparse CT reconstruction problem. However, the existing DL algorithm focuses on the minimization problem with the L2-norm regularization term, which leads to reconstruction quality deteriorating while the sampling rate declines further. Therefore, it is essential to improve the DL method to meet the demand of more dose reduction. In this paper, we replaced the L2-norm regularization term with the L1-norm one. It is expected that the proposed L1-DL method could alleviate the over-smoothing effect of the L2-minimization and reserve more image details. The proposed algorithm solves the L1-minimization problem by a weighting strategy, solving the new weighted L2-minimization problem based on IRLS (iteratively reweighted least squares). Through the numerical simulation, the proposed algorithm is compared with the existing DL method (adaptive dictionary based statistical iterative reconstruction, ADSIR) and other two typical compressed sensing algorithms. It is revealed that the proposed algorithm is more accurate than the other algorithms especially when further reducing the sampling rate or increasing the noise. The proposed L1-DL algorithm can utilize more prior information of image sparsity than ADSIR. By transforming the L2-norm regularization term of ADSIR with the L1-norm one and solving the L1-minimization problem by IRLS strategy, L1-DL could reconstruct the image more exactly.