Thomas Kirisits

Dr. Thomas Kirisits


Research Focus & Metrics

Academic Career Length

26Years (2001-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
28 February 2010 in Plant Pathology
Verified
Journal Article
Closed access
PDF file
TKThomas Kirisits
Thomas Kirisits
MMM. Matlakova
M. Matlakova
SMS. Mottinger‐Kroupa
S. Mottinger‐Kroupa
EHE. Halmschlager
E. Halmschlager
FLF. Lakatos
F. Lakatos

2 April 2013 in Forest Pathology
Verified
Journal Article
Closed access
PDF file
TKThomas Kirisits
Thomas Kirisits
LDL. Dämpfle
L. Dämpfle
KKK. Kräutler
K. Kräutler

16 March 2024 in Journal of Pest Science
Verified
Journal Article
Open access
PDF file
EPEva Papek
Eva Papek
ERElisabeth Ritzer
Elisabeth Ritzer
PBPeter Biedermann
Peter Biedermann
ACAnthony Cognato
Anthony Cognato
PBPeter Baier
Peter Baier
MSMartin Schebeck
Martin Schebeck
The bark beetle Ips acuminatus is an important pest in pine-dominated forests of Eurasia. Recently, the frequency of I. acuminatus outbreaks and mortality of host trees have increased, most likely as a result of climate change-related alterations in environmental conditions. Therefore, detailed information on the species’ natural history is essential to understand its potential to damage forests and to apply sustainable management measures. We provide a comprehensive overview on the life history of I. acuminatus, focusing on traits that might explain outbreaks and the ability to cause tree mortality. We review its importance for European forestry, outbreak behavior, host plant usage, reproductive biology, temperature-dependent development, diapause and overwintering behavior, and interactions with fungi, bacteria, nematodes and other arthropods. Interestingly, I. acuminatus has a strong nutritional dependency on the fungus Ophiostoma macrosporum, underlined by the presence of a prominent oral mycetangium, a spore-carrying organ, in females, which is not known for other Ips species. Moreover, I. acuminatus can reproduce sexually and asexually (pseudogamy). Additionally, information on the species’ evolutionary past provides valuable insights into the origin of certain traits. We present a phylogeny of the genus Ips and examine selected life-history traits in an evolutionary context. Together with its sister species Ips chinensis, I. acuminatus forms a separate clade within Ips. The ancestor of Ips bark beetles originated about 20 million years ago and was a pine-colonizing species inhabiting the Holarctic. Finally, open fields of research are identified to guide future work on this ecologically and economically important pine bark beetle.

17 January 2025 in Plant, Cell & Environment
Verified
Journal Article
Open access
JDJames M. Doonan
James M. Doonan
KBKatharina B. Budde
Katharina B. Budde
CKChatchai Kosawang
Chatchai Kosawang
ALAlbin Lobo
Albin Lobo
RVRita Verbylaite
Rita Verbylaite
LNLene Rostgaard Nielsen
Lene Rostgaard Nielsen
Common ash (Fraxinus excelsior) is under intensive attack from the invasive alien pathogenic fungus Hymenoscyphus fraxineus, causing ash dieback at epidemic levels throughout Europe. Previous studies have found significant genetic variation among genotypes in ash dieback susceptibility and that host phenology, such as autumn yellowing, is correlated with susceptibility of ash trees to H. fraxineus; however, the genomic basis of ash dieback tolerance in F. excelsior requires further investigation. Here, we integrate quantitative genetics based on multiple replicates and genome‐wide association analyses with machine learning to reveal the genetic architecture of ash dieback tolerance and of phenological traits in F. excelsior populations in six European countries (Austria, Denmark, Germany, Ireland, Lithuania, Sweden). Based on phenotypic data of 486 F. excelsior replicated genotypes we observed negative genotypic correlations between crown damage caused by ash dieback and intensity of autumn leaf yellowing within multiple sampling sites. Our results suggest that the examined traits are polygenic and using genomic prediction models, with ranked single nucleotide polymorphisms (SNPs) based on GWAS associations as input, a large proportion of the variation was predicted by unlinked SNPs. Based on 100 unlinked SNPs, we can predict 55% of the variation in disease tolerance among genotypes (as phenotyped in genetic trials), increasing to a maximum of 63% when predicted from 9155 SNPs. In autumn leaf yellowing, 52% of variation is predicted by 100 unlinked SNPs, reaching a peak of 72% using 3740 SNPs. Based on feature permutations within genomic prediction models, a total of eight nonsynonymous SNPs linked to ash dieback crown damage and autumn leaf yellowing (three and five SNPs, respectively) were identified, these were located within genes related to plant defence (pattern triggered immunity, pathogen detection) and phenology (regulation of flowering and seed maturation, auxin transport). We did not find an overlap between genes associated with crown damage level and autumn leaf yellowing. Hence, our results shed light on the difference in the genomic basis of ADB tolerance and autumn leaf yellowing despite these two traits being correlated in quantitative genetic analysis. Overall, our methods show the applicability of genomic prediction models when combined with GWAS to reveal the genomic architecture of polygenic disease tolerance enabling the identification of ash dieback tolerant trees for breeding or conservation purposes.


8 July 2015 in Forest Pathology
Verified
Journal Article
Closed access
PDF file
TKThomas Kirisits
Thomas Kirisits
KSK. Schwanda
K. Schwanda