Cannabis breeders are combining several genes to develop economically valuable fiber, seed, and medicinal hemp. This study analyzed the characteristics and selection of traits based on cannabidiol production of medicinal cannabis lines successfully grown under artificial light and nutrient solution cultivation conditions in smart farm conditions. Sixteen female plants were selected by seeding medical hemp F1 hybrid specimens obtained by randomly crossing Cherry Wine and native hemp from each country. The F1 generation was treated with 12 h light to induce flower differentiation. CBD production peaked on day 50 of the treatment, and this was selected as the harvesting day. All F1 hybrids were separated by leaf and inflorescence after collecting morphological data, and fresh and dry weights were measured. The CBD production of leaf and inflorescence per cubic meter was calculated. The CW21-5 line produced a total of 53.002 ± 0.228 g of CBD per cubic meter, the highest CBD producer. In addition, heatmap correlation analysis showed that most morphological data were not related to cannabinoid content. Principal Component Analysis (PCA) and Self-Organizing Map (SOM) analysis showed that CW21-5 is an arbitrary line that does not cluster with other lines, and the reason for its excellent CBD yield per cubic meter is that it has a narrow plant diameter and a high CBD content at the same time.