Joris Fournel

Prof. Joris Fournel

Institut de Mathématiques de Marseille, Marseille, Provence-Alpes-Côte d’Azur, France
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orcid

Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 January 2021 in Radiology: Artificial Intelligence
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Journal Article
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ABaxel bartoli
axel bartoli
JFJoris Fournel
Joris Fournel
ZBZakarya Bentatou
Zakarya Bentatou
GHGilbert Habib
Gilbert Habib
ALAlain Lalande
Alain Lalande
AJAlexis Jacquier
Alexis Jacquier
“Just Accepted” papers have undergone full peer review and have been accepted for publication in Radiology: Artificial Intelligence. This article will undergo copyediting, layout, and proof review ...

1 April 2024 in Radiology
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Journal Article
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NANay Aung
Nay Aung
ABaxel bartoli
axel bartoli
ERElisa Rauseo
Elisa Rauseo
SCSebastien Cortaredona
Sebastien Cortaredona
MSMihir M. Sanghvi
Mihir M. Sanghvi
AJAlexis Jacquier
Alexis Jacquier
In an analysis applying automated segmentation to UK Biobank MRI scans, hypertension, higher body mass index, and higher physical activity level were associated with increased left ventricular trabeculations in healthy middle-aged White adults.

18 March 2022 in Cells
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Journal Article
Open access
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ABaxel bartoli
axel bartoli
JFJoris Fournel
Joris Fournel
LALéa Ait-Yahia
Léa Ait-Yahia
FCFarah Cadour
Farah Cadour
FTFarouk Tradi
Farouk Tradi
AJAlexis Jacquier
Alexis Jacquier
Background: To develop a deep-learning (DL) pipeline that allowed an automated segmentation of epicardial adipose tissue (EAT) from low-dose computed tomography (LDCT) and investigate the link between EAT and COVID-19 clinical outcomes. Methods: This monocentric retrospective study included 353 patients: 95 for training, 20 for testing, and 238 for prognosis evaluation. EAT segmentation was obtained after thresholding on a manually segmented pericardial volume. The model was evaluated with Dice coefficient (DSC), inter-and intraobserver reproducibility, and clinical measures. Uni-and multi-variate analyzes were conducted to assess the prognosis value of the EAT volume, EAT extent, and lung lesion extent on clinical outcomes, including hospitalization, oxygen therapy, intensive care unit admission and death. Results: The mean DSC for EAT volumes was 0.85 ± 0.05. For EAT volume, the mean absolute error was 11.7 ± 8.1 cm3 with a non-significant bias of −4.0 ± 13.9 cm3 and a correlation of 0.963 with the manual measures (p < 0.01). The multivariate model providing the higher AUC to predict adverse outcome include both EAT extent and lung lesion extent (AUC = 0.805). Conclusions: A DL algorithm was developed and evaluated to obtain reproducible and precise EAT segmentation on LDCT. EAT extent in association with lung lesion extent was associated with adverse clinical outcomes with an AUC = 0.805.

7 November 2025 in European Radiology
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Journal Article
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JFJoris Fournel
Joris Fournel
MMMariangela De Masi
Mariangela De Masi
CLCharlotte Lu
Charlotte Lu
VOVirgile Omnes
Virgile Omnes
BMBaptiste Muselier
Baptiste Muselier
ABAxel Bartoli
Axel Bartoli
Objectives: 1. To develop a deep-learning segmentation model for automated measurement of maximal aortic diameter ( D max ) and volumes of aortic dissection components: true-lumen (TL), circulating false-lumen (CFL), and thrombus (Th) on CT angiography (CTA). 2. To assess the predictive value of these measures for adverse aortic remodeling in residual aortic dissection (RAD). Materials and methods: This retrospective study included 322 patients from two centers. The segmentation model was trained on 120 patients (Center 1) and tested on an internal dataset (30 patients, Center 1) and an external dataset (10 patients, Center 2) in terms of Dice Similarity Coefficient (DSC). The model extracted D max , global false-lumen volume (FL Glo  = CFL + Th), and local false-lumen volume (FL Loc , measured 3 cm around the largest diameter). Clinical validation was performed on 83 patients from Center1 (internal validation, 2-year follow-up) and 79 patients from Center2 (external validation, 4.5-year follow-up). Results: The segmentation model achieved high accuracy (Center 1, DSC: 0.93 TL, 0.93 CFL, 0.87 Th; Center 2, DSC: 0.92 TL, 0.93 CFL, 0.84 Th) with strong agreement between automated and manual measurements. Aortic remodeling occurred in 39/83 patients (46.9%) from Center1 and 33/79 patients (41.7%) from Center2. Aortic remodeling occurred in 39/83 patients (47%) from Center1 and 33/80 (42%) from Center2. FL Loc outperformed D max and FLGlo (Center 1: AUC = 0.83, 0.73, and 0.76; Center 2: AUC = 0.77, 0.64, and 0.70). At optimal thresholds, FL Loc showed good predictive performance (Center 1: Sensitivity = 0.87, Specificity = 0.68). Conclusion: Deep-learning segmentation provides accurate aortic measurements. Local false-lumen volumes predict adverse aortic remodeling in RAD better than diameter and global false-lumen volumes. Key Points: Question In residual aortic dissection (RAD) after type-A dissection, early identification of high-risk patients on initial CT angiography is crucial for endovascular treatment decisions . Findings False-lumen local volumes (3 cm around aortic dissection maximal diameters), obtained with an automatic deep-learning method, predict adverse remodeling better than diameter or global false-lumen volumes . Clinical relevance A deep-learning segmentation method of aortic dissection components on CTA, enabling automatic measurements of diameters and volumes is feasible. It provides local false-lumen volumes, a better predictive marker of adverse aortic remodeling than the currently used diameters and global volumes . Graphical

22 March 2022 in Research in Diagnostic and Interventional Imaging
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Journal Article
Open access
ABaxel bartoli
axel bartoli
JFJoris Fournel
Joris Fournel
AMArnaud Maurin
Arnaud Maurin
BMBaptiste Marchi
Baptiste Marchi
PHPaul Habert
Paul Habert
AJAlexis Jacquier
Alexis Jacquier
1) To develop a deep learning (DL) pipeline allowing quantification of COVID-19 pulmonary lesions on low-dose computed tomography (LDCT). 2) To assess the prognostic value of DL-driven lesion quantification. This monocentric retrospective study included training and test datasets taken from 144 and 30 patients, respectively. The reference was the manual segmentation of 3 labels: normal lung, ground-glass opacity(GGO) and consolidation(Cons). Model performance was evaluated with technical metrics, disease volume and extent. Intra- and interobserver agreement were recorded. The prognostic value of DL-driven disease extent was assessed in 1621 distinct patients using C-statistics. The end point was a combined outcome defined as death, hospitalization>10 days, intensive care unit hospitalization or oxygen therapy. The Dice coefficients for lesion (GGO+Cons) segmentations were 0.75±0.08, exceeding the values for human interobserver (0.70±0.08; 0.70±0.10) and intraobserver measures (0.72±0.09). DL-driven lesion quantification had a stronger correlation with the reference than inter- or intraobserver measures. After stepwise selection and adjustment for clinical characteristics, quantification significantly increased the prognostic accuracy of the model (0.82 vs. 0.90; p<0.0001). A DL-driven model can provide reproducible and accurate segmentation of COVID-19 lesions on LDCT. Automatic lesion quantification has independent prognostic value for the identification of high-risk patients.

5 May 2021
Verified
Book Chapter
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Alexandre BenoitAlexandre Benoit
Alexandre Benoit
BGBadih Ghattas
Badih Ghattas
EAEmna AMRI
Emna AMRI
JFJoris Fournel
Joris Fournel
PLPatrick Lambert
Patrick Lambert