Juan Felipe Restrepo-Arias

Prof. Dr. Juan Felipe Restrepo-Arias

orcid

Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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21 November 2022 in Agriculture
Verified
Journal Article
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JRJuan Felipe Restrepo-Arias
Juan Felipe Restrepo-Arias
JBJohn W Branch
John W Branch
GAGabriel AWAD
Gabriel AWAD
A novel method of disease diagnosis, based on images that capture every part of a diseased plant, such as the leaf, the fruit, the root, etc., is presented in this paper. As is well known, the plant genotypic and phenotypic characteristics can significantly impact how plants are affected by viruses, bacteria, or fungi that cause disease. Assume that these data are unknown at the outset and that the appropriate precautions are not taken to prevent classifications skewed toward uninteresting traits. An approach to avoid categorization bias brought on by the morphology of leaves is suggested in this study. The basis of this approach is the extraction of textural features. Additionally, Bayesian Optimization is suggested to obtain training hyperparameters that enable the creation of better-trained artificial neural networks. First, we initially pre-processed the images from the PlantVillage dataset to remove background noise. Then, tiles from images were used to reduce any potential bias from leaf form. Finally, several cutting-edge tiny convolutional neural networks (CNNs), created for contexts with little processing power, were trained on a new dataset of 85 × 85 × 3 px images. MobileNet, which had a 96.31% accuracy rate, and SqueezeNet, which had a 95.05% accuracy rate, were the models that predicted the best performance. The results were then examined using Precision and Recall measures, which are important for identifying plant diseases.

12 May 2022 in Sensors
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Journal Article
Open access
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JRJuan Felipe Restrepo-Arias
Juan Felipe Restrepo-Arias
JBJohn W Branch
John W Branch
JZJulian Andres Zapata-Cortes
Julian Andres Zapata-Cortes
Edwin Giovanny Paipa SanabriaEdwin Giovanny Paipa Sanabria
Edwin Giovanny Paipa Sanabria
MGMiguel Andres Garnica-López
Miguel Andres Garnica-López
The focus of this article is inland waterway transport. Different problems in this domain have been studied due to the increase in waterway traffic globally. Industry 4.0 technologies have become an alternative for the possible solution of these problems. For this reason, this paper aims to answer the following research questions: (1) What are the main problems in transporting cargo by inland waterway? (2) What technological strategies are being studied to solve these problems? (3) What technologies from Industry 4.0 are used within the technological strategies to solve the exposed problems? This study adopts a Systematic Literature Review (SLR) approach. For this work, were recovered 645 articles, 88 of which were eligible, from which we could identify five domains corresponding to (1) traffic monitoring, (2) smart navigation, (3) emission reduction, (4) analytics with big data, and (5) cybersecurity. The strategies currently being considered combine navigation technologies, such as AIS (Automatic Identification System), which offers a large amount of data, with Industry 4.0 tools and mainly machine learning techniques, to take advantage of data collected over a long time. This study is, to our knowledge, one of the first to show how Industry 4.0 technologies are currently being used to tackle inland waterway transport problems and current application trends in the scientific community, which is a first step for the development of future studies and more advanced solutions.

10 May 2025 in Agriculture
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Journal Article
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Joan Francisco Alvarado MolinaJoan Francisco Alvarado Molina
Joan Francisco Alvarado Molina
JRJuan Felipe Restrepo-Arias
Juan Felipe Restrepo-Arias
David VelásquezDavid Velásquez
David Velásquez
MMMikel Maiza
Mikel Maiza
Computer vision in the agriculture field aims to find solutions to guarantee and assure farmers the quality of their products. Therefore, studies to diagnose diseases and detect anomalies in crops, through computer vision, have been growing in recent years. However, crops such as cocoa required further attention to drive advances in computer vision to the detection of diseases. As a result, this paper aims to explore the computer vision methods used to diagnose diseases in crops, especially in cocoa. Therefore, the purpose of this paper is to provide answers to the following research questions: (Q1) What are the diseases affecting cocoa crop production? (Q2) What are the main Machine Learning algorithms and techniques used to detect and classify diseases in cocoa? (Q3) What are the types of imaging technologies (e.g., RGB, hyperspectral, or multispectral cameras) commonly used in these applications? (Q4) What are the main Machine Learning algorithms used in mobile applications and other platforms for cocoa disease detection? This paper carries out a Systematic Literature Review approach. The Scopus Digital, Science Direct Digital, Springer Link, and IEEE Explore databases were explored from January 2019 to August 2024. These questions have identified the main diseases that affect cocoa crops and their production. From this, it was identified that mostly Machine Learning algorithms based on computer vision are employed to detect anomalies in cocoa. In addition, the main sensors were explored, such as RGB and hyperspectral cameras, used for the creation of datasets and as a tool to diagnose or detect diseases. Finally, this paper allowed us to explore a Machine Learning algorithm to detect disease deployed in mobile and Internet of Things applications for detecting diseases in cocoa crops.

2 July 2025 in Computation
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Journal Article
Open access
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JRJuan Felipe Restrepo-Arias
Juan Felipe Restrepo-Arias
MMMaría José Montoya
María José Montoya
MMMaria Fernanda Moreno
Maria Fernanda Moreno
JBJohn W Branch
John W Branch
The accurate classification of cocoa pod ripeness is critical for optimizing harvest timing, improving post-harvest processing, and ensuring consistent quality in chocolate production. Traditional ripeness assessment methods are often subjective, labor-intensive, or destructive, highlighting the need for automated, non-invasive solutions. This study evaluates the performance of R-CNN-based deep learning models—Faster R-CNN and Mask R-CNN—for the detection and segmentation of cocoa pods across four ripening stages (0–2 months, 2–4 months, 4–6 months, and >6 months) using the RipSetCocoaCNCH12 dataset, which is publicly accessible, comprising 4116 labeled images collected under real-world field conditions, in the context of precision agriculture. Initial experiments using pretrained weights and standard configurations on a custom COCO-format dataset yielded promising baseline results. Faster R-CNN achieved a mean average precision (mAP) of 64.15%, while Mask R-CNN reached 60.81%, with the highest per-class precision in mature pods (C4) but weaker detection in early stages (C1). To improve model robustness, the dataset was subsequently augmented and balanced, followed by targeted hyperparameter optimization for both architectures. The refined models were then benchmarked against state-of-the-art YOLOv8 networks (YOLOv8x and YOLOv8l-seg). Results showed that YOLOv8x achieved the highest mAP of 86.36%, outperforming YOLOv8l-seg (83.85%), Mask R-CNN (73.20%), and Faster R-CNN (67.75%) in overall detection accuracy. However, the R-CNN models offered valuable instance-level segmentation insights, particularly in complex backgrounds. Furthermore, a qualitative evaluation using confidence heatmaps and error analysis revealed that R-CNN architectures occasionally missed small or partially occluded pods. These findings highlight the complementary strengths of region-based and real-time detectors in precision agriculture and emphasize the need for class-specific enhancements and interpretability tools in real-world deployments.

13 January 2023 in Ciencia y Tecnología Agropecuaria
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PAPaulina Arregocés-Guerra
Paulina Arregocés-Guerra
JRJuan Felipe Restrepo-Arias
Juan Felipe Restrepo-Arias
MMManuela Usme Martinez
Manuela Usme Martinez
JMJuan Pablo Montoya-Yepes
Juan Pablo Montoya-Yepes
JBJohn W Branch
John W Branch
Implementar las herramientas de la “agricultura inteligente” en Colombia, sobre todo en el dominio de los pequeños agricultores, encuentra serias dificultades. Aunque estos representan un 70,8 % del total de unidades de producción agropecuaria (upa), según la Encuesta Nacional Agropecuaria (dane, 2019), solo el 2,4 % de ellos cuenta con una conexión a internet y con el “internet de las cosas” (o IoT según sus siglas en inglés) es posible el monitoreo de variables y mejoras de las estrategias de producción agrícola. Dado lo anterior, este trabajo explora el uso de herramientas tecnológicas 4.0 en zonas rurales, donde se utilizó una plataforma IoT de acceso libre y tecnologías LoRa y LoRaWAN (Long Range Wide Area Network), con referencia de arquitectura LoRaFarM (LoRaWAN-based Smart Farming Modular IoT Architecture) y también se emplearon sensores en dos invernaderos de producción de hortalizas en el municipio de San Cristóbal. Así, la plataforma permitió a los agricultores la visualización en el panel de control de lecturas de temperatura, humedad relativa del aire, espectros de luz (visible, infrarrojo y ultravioleta) y voltaje de alimentación de los nodos de sensores. La transmisión de datos se configuró a aproximadamente 3 km hasta una puerta de enlace a internet y se logró el almacenamiento de datos hasta por 5 GB. Se concluye que es posible enlazar a agricultores a un nodo de internet, mejorando la cobertura de la asistencia técnica y se propone aumentar las distancias de monitoreo y cubrir un número mayor de agricultores en futuros trabajos.

18 June 2023 in Data
Verified
Journal Article
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JRJuan Felipe Restrepo-Arias
Juan Felipe Restrepo-Arias
MSMaría Isabel Salinas-Agudelo
María Isabel Salinas-Agudelo
MHMaría Isabel Hernandez-Pérez
María Isabel Hernandez-Pérez
AMAlejandro Marulanda-Tobón
Alejandro Marulanda-Tobón
MGMaría Camila Giraldo-Carvajal
María Camila Giraldo-Carvajal
Fruit counting and ripeness detection are computer vision applications that have gained strength in recent years due to the advancement of new algorithms, especially those based on artificial neural networks (ANNs), better known as deep learning. In agriculture, those algorithms capable of fruit counting, including information about their ripeness, are mainly applied to make production forecasts or plan different activities such as fertilization or crop harvest. This paper presents the RipSetCocoaCNCH12 dataset of cocoa pods labeled at four different ripeness stages: stage 1 (0–2 months), stage 2 (2–4 months), stage 3 (4–6 months), and harvest stage (>6 months). An additional class was also included for pods aborted by plants in the early stage of development. A total of 4116 images were labeled to train algorithms that mainly perform semantic and instance segmentation. The labeling was carried out with CVAT (Computer Vision Annotation Tool). The dataset, therefore, includes labeling in two formats: COCO 1.0 and segmentation mask 1.1. The images were taken with different mobile devices (smartphones), in field conditions, during the harvest season at different times of the day, which could allow the algorithms to be trained with data that includes many variations in lighting, colors, textures, and sizes of the cocoa pods. As far as we know, this is the first openly available dataset for cocoa pod detection with semantic segmentation for five classes, 4116 images, and 7917 instances, comprising RGB images and two different formats for labels. With the publication of this dataset, we expect that researchers in smart farming, especially in cocoa cultivation, can benefit from the quantity and variety of images it contains.