Soybean is the most grown high-protein crop in the world. Despite the rapid increase of acreage and production volume, European soybean production accounts for only 34% of its consumption in Europe. This study aims to support the optimal exploitation of genetic resources by European breeding programs by investigating the genetic diversity and the genetic structure of 207 European cultivars or American introductions registered in Europe, which were genotyped by the SoySNP50K array. The expected heterozygosity (H_e) was 0.34 for the entire collection and ranged among countries from 0.24 for Swiss cultivars to 0.32 for American cultivars (partly reflecting differences in sample size between countries). Cluster analysis grouped all genotypes into two main clusters with eight subgroups that corresponded to the country of origin of cultivars and their maturity group. Pairwise F_st values between countries of origin showed the highest differentiation of Swiss cultivars from the rest of the European gene pool, while the lowest mean differentiation was found between American introductions and all other European countries. On the other hand, F_st values between maturity groups were much lower compared to those observed between countries. In analysis of molecular variance, the total genetic variation was partitioned either by country of origin or by maturity group, explaining 9.1% and 3.5% of the total genetic variance, respectively. On the whole, our results suggest that the European soybean gene pool still has sufficient diversity due to the different historical breeding practices in western and eastern countries and the relatively short period of breeding in Europe.

Soybean is generally grown as a rainfed crop worldwide and very often is exposed to drought and high temperatures. The objectives of this study were to determine the performance and stability of 32 elite soybean genotypes for seed protein and oil contents across six dry and eight normal environments and to determine the influence of environment on the relationship between the two traits. In the combined ANOVA, genotypes (G), environments (E) and G × E were significant for both traits with protein content being more sensitive to environmental changes than oil content. Mean seed protein content decreased by 4.5% under drought conditions compared to normal ones and ranged from 2.3% to 7.1% for individual genotypes. At the same time drought caused a slight increase in seed oil content of +1.2%, with a range of −1.3% to +4.5% for individual genotypes. Genotype stability in terms of regression coefficient (b) and coefficient of variation (CV) was in moderate to weak negative correlation with mean genotype performance for protein content, while no correlation was observed between genotype stability and mean genotype performance for oil content. Protein and oil content were significantly negatively correlated in normal environments (r = −0.33), while no correlation between the traits was observed in dry environments (r = −0.02).