Andrew Jirasek

Prof. Andrew Jirasek


Research Focus & Metrics

Academic Career Length

27Years (2000-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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11 February 2010 in Physics in Medicine & Biology
Verified
Journal Article
Closed access
CBC Baldock
C Baldock
YDYves De Deene
Yves De Deene
SDS Doran
S Doran
GIG Ibbott
G Ibbott
AJAndrew Jirasek
Andrew Jirasek
LSL J Schreiner
L J Schreiner
Polymer gel dosimeters are fabricated from radiation sensitive chemicals which, upon irradiation, polymerize as a function of the absorbed radiation dose. These gel dosimeters, with the capacity to uniquely record the radiation dose distribution in three-dimensions (3D), have specific advantages when compared to one-dimensional dosimeters, such as ion chambers, and two-dimensional dosimeters, such as film. These advantages are particularly significant in dosimetry situations where steep dose gradients exist such as in intensity-modulated radiation therapy (IMRT) and stereotactic radiosurgery. Polymer gel dosimeters also have specific advantages for brachytherapy dosimetry. Potential dosimetry applications include those for low-energy x-rays, high-linear energy transfer (LET) and proton therapy, radionuclide and boron capture neutron therapy dosimetries. These 3D dosimeters are radiologically soft-tissue equivalent with properties that may be modified depending on the application. The 3D radiation dose distribution in polymer gel dosimeters may be imaged using magnetic resonance imaging (MRI), optical-computerized tomography (optical-CT), x-ray CT or ultrasound. The fundamental science underpinning polymer gel dosimetry is reviewed along with the various evaluation techniques. Clinical dosimetry applications of polymer gel dosimetry are also presented.

1 May 2005 in Applied Spectroscopy
Verified
Journal Article
Closed access
GSGeorg Schulze
Georg Schulze
AJAndrew Jirasek
Andrew Jirasek
MYMarcia M. L. Yu
Marcia M. L. Yu
ALArnel Lim
Arnel Lim
RTRobin F. B. Turner
Robin F. B. Turner
MBMichael W. Blades
Michael W. Blades
Observed spectra normally contain spurious features along with those of interest and it is common practice to employ one of several available algorithms to remove the unwanted components. Low frequency spurious components are often referred to as ‘baseline’, ‘background’, and/or ‘background noise’. Here we examine a cross-section of non-instrumental methods designed to remove background features from spectra; the particular methods considered here represent approaches with different theoretical underpinnings. We compare and evaluate their relative performance based on synthetic data sets designed to exemplify vibrational spectroscopic signals in realistic contexts and thereby assess their suitability for computer automation. Each method is presented in a modular format with a concise review of the underlying theory, along with a comparison and discussion of their strengths, weaknesses, and amenability to automation, in order to facilitate the selection of methods best suited to particular applications.

25 August 2000 in Physics in Medicine & Biology
Verified
Journal Article
Closed access
PDF file
MHM Hilts
M Hilts
CAC Audet
C Audet
CDC Duzenli
C Duzenli
AJAndrew Jirasek
Andrew Jirasek
A new three-dimensional dosimetry technique using x-ray computed tomography (CT) to analyse polymer gels is proposed. The CT imaging is sensitive to radiation-induced density changes that occur within irradiated polyacrylamide gel (PAG). In this preliminary study, a CT imaging protocol is developed to optimize CT images of PAG; the response of PAG CT number to dose (N(CT)-dose response) and the reproducibility of the response are investigated, and the use of CT to analyse PAG is compared with MRI. Experiments were conducted using two 1.5 l cylindrical PAG phantoms (3% acrylamide, 3% bis and 5% gelatin by weight), one irradiated with four intersecting 10 MV photon beams and the other with 10 sets of 6 MV parallel opposed circular radiosurgery fields. The final imaging protocol involves using optimum CT parameters (120 kVp and 200 mAs for our GE HiSpeed CT/i scanner), image averaging and background subtraction. The N(CT)-dose response is reproducible, linear up to 800-1000 cGy and is relatively insensitive to the gel temperature during imaging. The dose resolution is approximately 50 cGy for an image thickness of 10 mm. Despite the low dose resolution, preliminary results indicate that this CT technique provides accurate localization of high dose gradients such as those observed in stereotactic radiosurgery. Thus, given the availability and speed of CT scanners, the technique has the potential to be a valuable and practical 3D dose verification tool in radiation therapy.

1 August 2010 in Applied Spectroscopy
Verified
Journal Article
Closed access
QMQuinn Matthews
Quinn Matthews
AJAndrew Jirasek
Andrew Jirasek
JLJulian Lum
Julian Lum
XDXiaobo Duan
Xiaobo Duan
ABAlexandre Brolo
Alexandre Brolo
In this work we investigate the capability of Raman microscopy (RM) to detect inherent sources of biochemically based spectral variability between single cells of a human tumor cell line (DU145) cultured in vitro. Principal component analysis (PCA) is used to identify differences in single-cell Raman spectra. These spectral differences correlate with (1) cell cycle progression and (2) changing confluency of a cell culture during the first 3 to 4 days after sub-culturing. Cell cycle regulatory drugs are used to synchronize the cell cycle progression of cell cultures, and flow cytometry is used to determine the cell cycle distribution of cell cultures at the time of Raman analysis. Spectral variability arising from cell cycle progression is (1) expressed as varying intensities of protein and nucleic acid features relative to lipid features, (2) well correlated with known biochemical changes in cells as they progress through the cell cycle, and (3) shown to be the most significant source of inherent spectral variability between cells. Furthermore, the specific biomolecules responsible for the observed spectral variability due to both cell cycle progression and changes in cell culture confluency can be identified in the first and second components of principal component analysis (PCA). Our characterization of the inherent sources of variability in Raman spectra of single human cells will be useful for understanding subtle spectral differences in RM studies of single cells.

18 August 2010 in Physics in Medicine & Biology
Verified
Journal Article
Closed access
AJAndrew Jirasek
Andrew Jirasek
MHM Hilts
M Hilts
KMKimberley Mcauley
Kimberley Mcauley
A primary limitation of current x-ray CT polymer gel dosimetry is the low contrast, and hence poor dose resolution, of dose images produced by the system. The low contrast is largely due to the low-dose sensitivity of current formulations of polymer gel for x-ray CT imaging. This study reports on the investigation of new dosimeter formulations with improved dose sensitivity for x-ray CT polymer gel dosimetry. We incorporate an isopropanol co-solvent into an N-isopropylacrylamide-based gel formulation in order to increase the total monomer/crosslinker concentration (%T) within the formulation. It is shown that gels of high %T exhibit enhanced dose sensitivity and dose resolutions over traditional formulations. The gels are shown to be temporally stable and reproducible. A single formulation (16%T) is used to demonstrate the capabilities of the x-ray CT polymer gel dosimetry system in measuring known dose distributions. A 1 L gel volume is exposed to three separate irradiations: a single-field percent depth dose, a two-field 'cross' and a three-field 'test case'. The first two irradiations are used to generate a dose calibration curve by which images are calibrated. The calibrated images are compared with treatment planning predictions and it is shown that the x-ray CT polymer gel dosimetry system is capable of capturing spatial and dose information accurately. The proposed new gel formulation is shown to be sensitive, stable and to improve the dose resolution over current formulations so as to provide a feasible gel for clinical applications of x-ray CT polymer gel dosimetry.

21 March 2006 in Physics in Medicine & Biology
Verified
Journal Article
Closed access
AJAndrew Jirasek
Andrew Jirasek
MHM Hilts
M Hilts
CSC Shaw
C Shaw
PBP Baxter
P Baxter
Of the antioxidants used to scavenge oxygen in polymer gel dosimeters, tetrakis (hydroxymethyl) phosphonium chloride (THPC) has been shown to hold great promise due to its rapid oxygen scavenging abilities. In this study we (a) investigate the use of THPC as an antioxidant for polyacrylamide gel (PAGAT) dosimeters used in conjunction with x-ray computed tomography (CT) and (b) work to establish the reaction mechanisms of THPC with the polymer gel constituents. We establish the dose response reproducibility of PAGAT dosimeters when imaged with CT and show that PAGAT dosimeters exhibit highly reproducible dose responses for a range of irradiation times post gel manufacture (2-6 h) and CT imaging times post gel irradiation (1-5 days). The THPC concentration within the gel leading to a maximized dose response and minimized O(2) inhibition of polymerization is found to be approximately 4.5 mM. We further assess the stability of PAGAT dosimeters by investigating the reactions of THPC with the individual gel constituents. The importance of utilizing deionized water in polymer gel manufacture is noted. We show that, while THPC remains unreactive with acrylamide and bis-acrylamide under unirradiated conditions, THPC can react with gelatin to increase the cross-linking of the gelatin matrix in unirradiated dosimeters. THPC reactions with gelatin can lead to the lower observed dose sensitivity of PAGAT (approximately 0.36 +/- 0.04 H Gy(-1)) as compared to polyacrylamide gels manufactured under anoxic conditions (approximately 0.83 +/- 0.03 H Gy(-1)). The reactions of THPC which lead to O(2) scavenging, and potential reactions of THPC with other gel constituents, are proposed.