Joana Pereira

Mrs. Joana Pereira

orcid

Research Focus & Metrics

Academic Career Length

5Years (2022-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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Verified
Journal Article
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RARita Almeida
Rita Almeida
CMCatarina Sofia Mateus
Catarina Sofia Mateus
MAMaria Judite Alves
Maria Judite Alves
JMJoão Pedro Marques
João Pedro Marques
JPJoana Pereira
Joana Pereira
BQBernardo Quintella
Bernardo Quintella
The meagre Argyrosomus regius, one of the largest sciaenidae in the world, is a valuable resource for fisheries and aquaculture. Despite its socioeconomic relevance, knowledge about population dynamics and wild stocks is still scarce, and conservation risks are associated with overexploitation. Two genetic distinct groups, one in the North Atlantic Ocean and one in the eastern Mediterranean Sea, were identified by previous studies. However, little is known about the genetic structure of the Atlantic group, where four important spawning areas have been identified. To assess if each spawning area is an independent breeding unit, the genetic diversity, populational structure, and demographic history of A. regius along the North–East and Eastern Central Atlantic coast were analyzed, using 15 microsatellite loci. Results corroborate the hypothesis tested, suggesting four genetic groups: a first group encompassing individuals from the Gironde spawning area, a second group encompassing individuals from the Tagus spawning area, a third group corresponding to individuals captured in the Algarve region, and a forth group gathering individuals from Morocco and Mauritania. This study reveals the need for specific fisheries management plans considering genetic structure information, and highlights the need for international cooperation.

2 January 2023 in Estuarine, Coastal and Shelf Science
Verified
Journal Article
Closed access
EPEsmeralda Pereira
Esmeralda Pereira
CMCatarina S. Mateus
Catarina S. Mateus
MAMaria J. Alves
Maria J. Alves
RARita Almeida
Rita Almeida
JPJoana Pereira
Joana Pereira
PAPedro R. Almeida
Pedro R. Almeida

Verified
Conference Paper
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CACarlos Alexandre
Carlos Alexandre
SSSara Silva
Sara Silva
CMCatarina Sofia Mateus
Catarina Sofia Mateus
MLMaria João Lança
Maria João Lança
BQBernardo Quintella
Bernardo Quintella
PAPedro Almeida
Pedro Almeida
Atlantic salmon (Salmo salar L.) are an emblematic anadromous fish species that inhabit marine and freshwater ecosystems in the Northern Hemisphere. In Portugal, the southern limit of its global distribution range, the species is classified as Critically Endangered (CR), and occurs only in the Minho and Lima rivers, which hold the most abundant populations, with occasional confirmed occurrences in the Cávado and Douro rivers. In this region, the species faces several highly detrimental threats (e.g., dams and other obstacles, unsuitable fishing legislation, and climate change), but some knowledge gaps about the biology, ecology, and structure of these southern populations often impair any attempt to define and implement effective management and conservation programs. We present the objectives, actions, and preliminary results of a set of projects and partnerships, recently implemented in Portugal, focused on increasing knowledge about local salmon populations to contribute to the development of suitable management guidelines for the target species. Within the project “SALMONLINK—Contribution of scientists and fishermen to the conservation and participatory management of Atlantic salmon populations in Portugal”, several actions have been implemented for the past three years to improve knowledge about this species, including the assessment of salmon distribution and abundance, adult and juvenile migration patterns, and population structure. In complement to these measures, we are also implementing (in Portugal) the international projects “SMOLTrack III & IV—Quantifying smolt survival from source to sea: informing management strategies to optimize returns”, which are specifically focused on smolt seaward migration and aim to obtain more information on this particularly vulnerable life-stage. Combined with a strong link with the local commercial and recreational fishing communities, who are providing data on salmon catches and contributing to an overview of the socioeconomic value of salmon in Portugal, these projects will contribute to increasing the knowledge of these populations, and at the same time, within the context of the constant transfer of knowledge between all the involved parties, advise the adaptation of the current fishing legislation to the conservation and management requirements of this highly endangered species.

Verified
Conference Paper
Open access
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ADAndreia Ferreira Domingues
Andreia Ferreira Domingues
CACarlos Alexandre
Carlos Alexandre
CMCatarina Sofia Mateus
Catarina Sofia Mateus
SSSara Silva
Sara Silva
JPJoana Pereira
Joana Pereira
PAPedro Almeida
Pedro Almeida
The brown trout (Salmo trutta L.) is one of the most iconic native species from European river ecosystems and is also one of the main species of interest for recreational fishing activities (e.g., fly fishing). This species has a significant potential to attract anglers and related investment to the main fishing grounds, which are usually located in poorly developed areas and away from main city centers. Due to its environmental and socioeconomic value, this species is often targeted by management programs directed to the protection and sustainable exploitation of this valuable natural resource. One of the most common actions to enhance the abundance and condition of trout populations is the restocking of wild populations with fish from aquaculture facilities. However, most fish come from fishfarms using production methods such as high densities in the tanks, use of commercial food and standardized feeding methods, lack of environmental stimulus, and domestication of breeding stocks, which usually results in poor fitness and very low survival rates after release. This consequently leads to reduced success of these management actions. To contribute to solving these problems and enhancing the success of restocking actions for the recovery and sustainable enhancement of wild trout populations, we propose a novel approach to the production of this species, by testing and implementing a new protocol that aims to produce wild-reared trout. These fish come from wild breeders and will be produced with the least human contact in conditions that mimic their natural habitat. Taking advantage of a recently remodeled and re-equipped aquaculture facility, located in Central Portugal (Posto Aquícola de Campelo, Figueiró dos Vinhos), we are rearing trout in low densities (10–20 trout/m3), like the ones observed in natural habitats, using live food (larvae and insects), and subjected to environmental stimuli such as refuges, and water and flow variability, equivalent to those observed in local streams. Accompanied by a pre- and post-restocking monitoring program (e.g., evaluation of trout abundances and habitat in the target stream, dispersion and movement patterns and survival), this study will contribute to enhancing the success of future restocking actions, promoting the sustainable enhancement of wild trout populations, and, thus, increasing the interest of restocked fishing grounds for angling activities and associated incomes.

20 August 2025 in Aquatic Conservation: Marine and Freshwater Ecosystems
Verified
Journal Article
Closed access
JPJoana Pereira
Joana Pereira
SSSara Silva
Sara Silva
RARita Almeida
Rita Almeida
ADAndreia Ferreira Domingues
Andreia Ferreira Domingues
MAMaria Judite Alves
Maria Judite Alves
CMCatarina S. Mateus
Catarina S. Mateus

29 January 2026 in Microorganisms
Verified
Journal Article
Open access
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VCVinícius Oliveira Casais
Vinícius Oliveira Casais
JPJoana Pereira
Joana Pereira
EGEva Garcia
Eva Garcia
CCCatarina Coelho
Catarina Coelho
DFDaniela Figueira
Daniela Figueira
JCJoana Cardoso Costa
Joana Cardoso Costa
Bacterial canker, caused by Pseudomonas syringae pv. actinidiae (Psa) is a major threat to global kiwifruit production. Copper-based bactericides remain widely used, but increasing resistance highlights the urgency of developing sustainable alternatives. Understanding the functional capabilities of phyllosphere bacteria under copper pressure is critical for designing microbiome-informed management strategies. This study provides a culture-based functional inventory of bacteria associated with Actinidia chinensis var. deliciosa leaves from Portuguese orchards under long-term copper management, aiming to identify native taxa with traits relevant to plant health and resilience. A total of 1058 isolates were recovered and grouped into 261 Random Amplification of Polymorphic DNA (RAPD) clusters, representing 58 species across 29 genera. Representative strains were screened for Plant Growth-Promoting (PGP) traits (Indole-3-acetic acid (IAA), siderophore production, phosphate solubilization, ammonia production), copper tolerance, and in vitro antagonism against Psa. Copper resistance was widespread (53.3% of isolates with MIC ≥ 0.8 mM), including the first evidence of a highly copper-resistant PSA strain in Portuguese kiwifruit orchards and an exceptionally resistant non-pathogenic strain closely related to Erwinia iniecta (MIC 2.8 mM). A subset of 25 isolates combined all four PGP traits, and several also exhibited antagonism against Psa in vitro, among them Bacillus pumilus consistently supressed pathogen growth. Notably, antagonistic and multifunctional traits co-occurred in some isolates, highlighting promising candidates for integrated biocontrol strategies. Overall, the findings reveal a functionally diverse and copper-resilient collection of cultured bacteria, offering both challenges and opportunities for microbiome-based disease management. This work establishes a robust functional basis for subsequent in planta validation and the development of sustainable, microbiome-informed approaches for Psa control.