Elsa Amilhat

Dr. Elsa Amilhat


Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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24 February 2016 in Scientific Reports
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EAElsa Amilhat
Elsa Amilhat
KAKim Aarestrup
Kim Aarestrup
EFElisabeth Faliex
Elisabeth Faliex
GSGaël Simon
Gaël Simon
HWHåkan Westerberg
Håkan Westerberg
DRDavid Righton
David Righton
The migration route and the spawning site of the European eel Anguilla anguilla are still uncertain. It has been suggested that the Mediterranean eel stock does not contribute to spawning because there is no evidence of eels leaving the Mediterranean Sea. To test this hypothesis, we equipped eight female silver eels from the south of France with pop-up satellite tags during escapement from coastal waters. Once in deeper water, the eels quickly established diel vertical migration (DVM) between the upper and lower mesopelagic zone. Five tagged eels were taken by predators within the Mediterranean, but two eels reached the Atlantic Ocean after six months and at distances greater than 2000 km from release. These eels ceased their DVM while they negotiated the Gibraltar Strait, and remained in deep water until they reached the Atlantic Ocean, when they recommenced DVM. Our results are the first to show that eels from Mediterranean can cross the Strait of Gibraltar and continue their migration into the Atlantic Ocean. This finding suggests that Mediterranean countries, as for other EU states, have an important role to play in contributing to conservation efforts for the recovery of the European eel stock.

15 July 2013 in Ecology of Freshwater Fish
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EAElsa Amilhat
Elsa Amilhat
GFGéraldine Fazio
Géraldine Fazio
GSGaël Simon
Gaël Simon
MMMarc Manetti
Marc Manetti
SPSéverine Paris
Séverine Paris
EFElisabeth Faliex
Elisabeth Faliex

19 March 2021 in Water
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RLRaphael Lagarde
Raphael Lagarde
JPJason Peyre
Jason Peyre
EAElsa Amilhat
Elsa Amilhat
FBFrançois Bourrin
François Bourrin
FPFrançois Prellwitz
François Prellwitz
EFElisabeth Faliex
Elisabeth Faliex
Transitional ecosystems and, particularly, Mediterranean lagoons represent important habitats for the European eel (Anguilla anguilla) population. In these habitats many anthropogenic pressures can disturb eel movements and, in turn, negatively affect the population. Despite the importance of movements during the non-migrant growing stage in eels, this topic is understudied in Mediterranean lagoons. We thus aim to describe the diel and seasonal phenology and the effect of environmental drivers on non-migrant eel movements. Videos obtained from an Adaptive Resolution Imaging Sonar (ARIS) acoustic camera that continuously recorded from October 2018 to April 2020 were processed to evaluate the daily number of eels swimming toward the lagoon. More than 60% of the 7207 eels observed were females with a size >45 cm. Movements were year-round and predominantly during the night. A Boosted Regression Tree analysis demonstrated that, among the 10 environmental drivers studied, flow velocity, water temperature, discharge of the main tributary, wind velocity and atmospheric pressure, had the strongest influence on eel movement activity. Non-migrant eel movements should be better incorporated into lagoon management plans through actions such as limiting dredging activities from 18:00 to midnight, especially when the water flows toward the lagoon and when the water temperature is higher than 12 °C.

26 July 2023 in Fishes
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CPCinzia Podda
Cinzia Podda
JCJacopo Culurgioni
Jacopo Culurgioni
RDRiccardo Diciotti
Riccardo Diciotti
FRANCESCO PALMASFRANCESCO PALMAS
FRANCESCO PALMAS
EAElsa Amilhat
Elsa Amilhat
ASAndrea Sabatini
Andrea Sabatini
An otolith shape and morphometric analysis was performed on European eel (Anguilla anguilla) subpopulations from five rivers and three coastal lagoons of Sardinia (central-western Mediterranean) to assess the role of different habitats on otolith development. Sagittal otolith shape was described by 11 harmonics from elliptic Fourier descriptors. Comparisons among the harmonics were run through canonical discriminant analyses (CDAs). The CDA reclassification rate (75.7%) demonstrated a spatial environmental discrimination among local eel subpopulations of Sardinia. The Euclidean distance values demonstrated a dissimilarity between the river and lagoon groups. The form factor and roundness shape indices were significantly higher in the river group than in the lagoon group. The distances of the first three rings to the otolith core revealed site-specific otolith development. Moreover, the annual otolith growth rate was faster in the lagoon group than in the river group. The differences among the studied sites in terms of sagittal otolith shape could relate to changes in different local stocks potentially related to environmental peculiarities. Establishing a direct correlation between otolith morphology and environmental factors is challenging, and further studies are needed to investigate the relationship between habitat type/environmental variation and growth/body characteristics of eels. Nevertheless, the achieved results suggest that this method can be considered to be a valuable tool for studying the ontogeny of the European eel.

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EFElisabeth Faliex
Elisabeth Faliex
CACarlos Antunes
Carlos Antunes
ABAgnès Bardonnet
Agnès Bardonnet
ACAnna Costarrosa
Anna Costarrosa
ESEstibaliz Díaz Silvestre
Estibaliz Díaz Silvestre
EAElsa Amilhat
Elsa Amilhat
The European eel is critically endangered (IUCN, 2020) due to several factors (climate change, barriers to migration, pollution, unsustainable exploitation, illegal trading and poaching, and pathogens). However, the relative effect of these factors can hardly be quantified. Anguillicola crassus is a nematode known as one of the most harmful parasites for the European eel. Being hematophagous and inducing serious alterations to the swimbladder, it can reduce swimming performances and thus may impair silver eel migration and reproduction. Since its introduction (in the early 1980s) from Asia to Europe, this invasive parasite has spread rapidly through its new host’s geographic range. In that context, an extensive study was conducted in 2018 in seven pilot basins (one lagoon and two rivers on the Mediterranean side and four rivers on the Atlantic side) in the SUDOANG project to investigate the epidemiological status of A. crassus and the parameters influencing its distribution. The eel population was monitored in a harmonized way through a sampling network using standardized data collection methods. We sampled 36 to 96 eels (yellow and silver stages) in each pilot basin by electrofishing or fyke nets. We identified significant differences of A. crassus occurrence between basins, which were partly explained by eel life traits (density, feeding activity) and habitat characteristics (temperature, salinity). This study contributes to quantifying and better understanding the mechanisms of infection of A. crassus in different ecosystems and to increasing the awareness of its possible negative effects on the eels of the Sudoe Area.

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MMMaria Mateo
Maria Mateo
ESEstibaliz Díaz Silvestre
Estibaliz Díaz Silvestre
BLBeaulaton Laurent
Beaulaton Laurent
HDHilaire Drouineau
Hilaire Drouineau
CACarlos Antunes
Carlos Antunes
CBCédric Briand
Cédric Briand
The European eel population has declined over the last 50 years and is outside safe biological limits. In 2007, the European Commission enforced a regulation to ensure that all Member States implement Management Plans to achieve an escapement rate of 40% for silver eels. However, escapement is assessed using diverse methods, and therefore, estimates of different countries are not comparable. Thus, European scientists and managers face the challenge of finding a method that could be applied all along the European eel distribution range using widely available data. During the SUDOANG project, the Eel Density Analysis model (EDA) was used to estimate the silver eel escapement in Spain, France, and Portugal. EDA can estimate silver eel escapement at different scales (basin, EMU, country, international) using data from routine electrofishing surveys, such as those collected for the Water Framework Directive (WFD). EDA is based on open-source software and is widely applicable to European rivers. A chained river network in the three countries was built, including the hydrological attributes, the location, and the characteristics of 10,574 obstacles. A total of 46,118 electrofishing operations from 1985 to 2019 were also compiled and projected to the hydrographic network. Finally, EDA was implemented through the sub-models on eel presence–absence, density, size structure, and silvering. EDA estimated a total fluvial population of 12.3, 11.7, and 5.8 million silver eels for 2015 in France, Spain, and Portugal, respectively. Eel presence and abundance decreased as the altitude and the distance to the sea increased. Finally, by setting the cumulated height of dams to zero, EDA provided an estimate of the effect of habitat loss due to dams on the eel population. These results correspond to the first assessment of silver eels carried out simultaneously and with the same methodologies in three European countries.