Thomas J. Walsh

Prof. Dr. Thomas J. Walsh

orcid

Research Focus & Metrics

Academic Career Length

37Years (1990-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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19 July 2022 in Antimicrobial Agents and Chemotherapy
Verified
Journal Article
Closed access
SJSamantha Jacobs
Samantha Jacobs
Jonathan L JacobsJonathan L Jacobs
Jonathan L Jacobs
EDEmily K. Dennis
Emily K. Dennis
STSarah Taimur
Sarah Taimur
MRMeenakshi Rana
Meenakshi Rana
VCVishnu Chaturvedi
Vishnu Chaturvedi
Candida auris is an urgent antimicrobial resistance threat due to its global emergence, high mortality, and persistent transmissions. Nearly half of C. auris clinical and surveillance cases in the United States are from the New York and New Jersey Metropolitan area.

21 November 2023 in Journal of Clinical Microbiology
Verified
Journal Article
Open access
SHSybren Sijbrand de Hoog
Sybren Sijbrand de Hoog
TWThomas J. Walsh
Thomas J. Walsh
Sarah AhmedSarah Ahmed
Sarah Ahmed
Ana Alastruey-IzquierdoAna Alastruey-Izquierdo
Ana Alastruey-Izquierdo
BABarbara D. Alexander
Barbara D. Alexander
SZSean Zhang
Sean Zhang
The rapid pace of name changes of medically important fungi is creating challenges for clinical laboratories and clinicians involved in patient care. We describe two sources of name change which have different drivers, at the species versus the genus level. Some suggestions are made here to reduce the number of name changes. We urge taxonomists to provide diagnostic markers of taxonomic novelties. Given the instability of phylogenetic trees due to variable taxon sampling, we advocate to maintain genera at the largest possible size. Reporting of identified species in complexes or series should where possible comprise both the name of the overarching species and that of the molecular sibling, often cryptic species. Because the use of different names for the same species will be unavoidable for many years to come, an open access online database of the names of all medically important fungi, with proper nomenclatural designation and synonymy, is essential. We further recommend that while taxonomic discovery continues, the adaptation of new name changes by clinical laboratories and clinicians be reviewed routinely by a standing committee for validation and stability over time, with reference to an open access database, wherein reasons for changes are listed in a transparent way.

21 December 2022 in Clinical Microbiology Reviews
Verified
Journal Article
Closed access
MGMaria N. Gamaletsou
Maria N. Gamaletsou
BRBlandine Rammaert
Blandine Rammaert
BBBarry Brause
Barry Brause
MBMarimelle A. Bueno
Marimelle A. Bueno
SDSanjeet Dadwal Dadwal
Sanjeet Dadwal Dadwal
TWThomas J. Walsh
Thomas J. Walsh
Osteoarticular mycoses are chronic debilitating infections that require extended courses of antifungal therapy and may warrant expert surgical intervention. As there has been no comprehensive review of these diseases, the International Consortium for Osteoarticular Mycoses prepared a definitive treatise for this important class of infections.

25 October 2022 in Journal of Fungi
Verified
Journal Article
Open access
PDF file
DADavid Angulo
David Angulo
BABarbara Alexander
Barbara Alexander
Riina Rautemaa-RichardsonRiina Rautemaa-Richardson
Riina Rautemaa-Richardson
Ana Alastruey-IzquierdoAna Alastruey-Izquierdo
Ana Alastruey-Izquierdo
MHMartin Hoenigl
Martin Hoenigl
TWThomas J. Walsh
Thomas J. Walsh
Molds are ubiquitous in the environment, and immunocompromised patients are at substantial risk of morbidity and mortality due to their underlying disease and the resistance of pathogenic molds to currently recommended antifungal therapies. This combination of weakened-host defense, with limited antifungal treatment options, and the opportunism of environmental molds renders patients at risk and especially vulnerable to invasive mold infections such as Aspergillus and members of the Order Mucorales. Currently, available antifungal drugs such as azoles and echinocandins, as well as combinations of the same, offer some degree of efficacy in the prevention and treatment of invasive mold infections, but their use is often limited by drug resistance mechanisms, toxicity, drug-drug interactions, and the relative paucity of oral treatment options. Clearly, there is a need for agents that are of a new class that provides adequate tissue penetration, can be administered orally, and have broad-spectrum efficacy against fungal infections, including those caused by invasive mold organisms. Ibrexafungerp, an orally bioavailable glucan synthase inhibitor, is the first in a new class of triterpenoid antifungals and shares a similar target to the well-established echinocandins. Ibrexafungerp has a very favorable pharmacokinetic profile for the treatment of fungal infections with excellent tissue penetration in organs targeted by molds, such as the lungs, liver, and skin. Ibrexafungerp has demonstrated in vitro activity against Aspergillus spp. as well as efficacy in animal models of invasive aspergillosis and mucormycosis. Furthermore, ibrexafungerp is approved for use in the USA for the treatment of women with vulvovaginal candidiasis. Ibrexafungerp is currently being evaluated in clinical trials as monotherapy or in combination with other antifungals for treating invasive fungal infections caused by yeasts and molds. Thus, ibrexafungerp offers promise as a new addition to the clinician’s armamentarium against these difficult-to-treat infections.

12 January 2022 in F1000Research
Verified
Journal Article
Open access
PDF file
SJSamantha Jacobs
Samantha Jacobs
PZPanagiotis Zagaliotis
Panagiotis Zagaliotis
TWThomas J. Walsh
Thomas J. Walsh
Invasive fungal diseases due to resistant yeasts and molds are an important and increasing public health threat, likely due to a growing population of immunosuppressed hosts, increases in antifungal resistance, and improvements in laboratory diagnostics. The significant morbidity and mortality associated with these pathogens bespeaks the urgent need for novel safe and effective therapeutics. This review highlights promising investigational antifungal agents in clinical phases of development: fosmanogepix, ibrexafungerp, rezafungin, encochleated amphotericin B, oteseconazole (VT-1161), VT-1598, PC945, and olorofim. We discuss three first-in-class members of three novel antifungal classes, as well as new agents within existing antifungal classes with improved safety and tolerability profiles due to enhanced pharmacokinetic and pharmacodynamic properties.

11 October 2022 in Open Forum Infectious Diseases
Verified
Journal Article
Open access
PDF file
TCTempe K Chen
Tempe K Chen
JBJagmohan S Batra
Jagmohan S Batra
DMDavid E Michalik
David E Michalik
JCJacqueline Casillas
Jacqueline Casillas
RPRamesh Patel
Ramesh Patel
TWThomas J. Walsh
Thomas J. Walsh
Sargramostim (yeast-derived, glycosylated recombinant human granulocyte-macrophage colony-stimulating factor [rhu GM-CSF]) augments innate and adaptive immune responses and accelerates hematopoietic recovery of chemotherapy-induced neutropenia. However, considerably less is known about its efficacy as adjunctive immunotherapy against invasive fungal diseases (IFDs). The clinical courses of 15 patients with pediatric malignancies and IFDs treated adjunctively with sargramostim at a single institution were analyzed in a retrospective cohort review. Further, a systematic review of published reports of rhu GM-CSF for IFDs was also conducted. Among 65 cases, 15 were newly described pediatric patients and 50 were previously published cases of IFDs treated with rhu GM-CSF. Among the newly reported pediatric patients, IFDs were caused by Candida spp., Trichosporon sp., and molds (Aspergillus spp., Rhizopus sp., Lichtheimia sp., and Scedosporium sp). Twelve (80%) were neutropenic at baseline, and 12 (80%) were refractory to antifungal therapy. Among 12 evaluable patients, the overall response rate was 92% (8 [67%] complete responses, 3 [25%] partial responses, and 1 [8%] stable). Treatment is ongoing in the remaining 3 patients. Among 50 published cases (15 Candida spp., 13 Mucorales, 11 Aspergillus spp., 11 other organisms), 20 (40%) had baseline neutropenia and 36 (72%) were refractory to standard therapy before rhu GM-CSF administration. Consistent with responses in the newly reported patients, the overall response rate in the literature review was 82% (40 [80%] complete responses, 1 [2%] partial response, and 9 [18%] no response). Sargramostim may be a potential adjunctive immunomodulator for selected patients with hematological malignancies and refractory IFDs.