Alexander Krasichkov

Dr. Alexander Krasichkov


Research Focus & Metrics

Academic Career Length

6Years (2021-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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17 October 2021 in Mathematics
Verified
Journal Article
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Dmitrii KaplunDmitrii Kaplun
Dmitrii Kaplun
AKAlexander Krasichkov
Alexander Krasichkov
PCPetr Chetyrbok
Petr Chetyrbok
NONikolay Oleinikov
Nikolay Oleinikov
AGAnupam Garg
Anupam Garg
HPHusanbir Pannu
Husanbir Pannu
With the evolution of modern digital pathology, examining cancer cell tissues has paved the way to quantify subtle symptoms, for example, by means of image staining procedures using Eosin and Hematoxylin. Cancer tissues in the case of breast and lung cancer are quite challenging to examine by manual expert analysis of patients suffering from cancer. Merely relying on the observable characteristics by histopathologists for cell profiling may under-constrain the scale and diagnostic quality due to tedious repetition with constant concentration. Thus, automatic analysis of cancer cells has been proposed with algorithmic and soft-computing techniques to leverage speed and reliability. The paper’s novelty lies in the utility of Zernike image moments to extract complex features from cancer cell images and using simple neural networks for classification, followed by explainability on the test results using the Local Interpretable Model-Agnostic Explanations (LIME) technique and Explainable Artificial Intelligence (XAI). The general workflow of the proposed high throughput strategy involves acquiring the BreakHis public dataset, which consists of microscopic images, followed by the application of image processing and machine learning techniques. The recommended technique has been mathematically substantiated and compared with the state-of-the-art to justify the empirical basis in the pursuit of our algorithmic discovery. The proposed system is able to classify malignant and benign cancer cell images of 40× resolution with 100% recognition rate. XAI interprets and reasons the test results obtained from the machine learning model, making it reliable and transparent for analysis and parameter tuning.

24 December 2021 in Micromachines
Verified
Journal Article
Open access
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NSNikita Sitkov
Nikita Sitkov
Tatiana ZiminaTatiana Zimina
Tatiana Zimina
AKAlexandr Alexandrovich Kolobov
Alexandr Alexandrovich Kolobov
ESEvgeny Sevostyanov
Evgeny Sevostyanov
VTValentina Trushlyakova
Valentina Trushlyakova
Dmitrii KaplunDmitrii Kaplun
Dmitrii Kaplun
A study of the peculiarities and a comparative analysis of the technologies used for the fabrication of elements of novel hybrid microfluidic biochips for express biomedical analysis have been carried out. The biochips were designed with an incorporated microfluidic system, which enabled an accumulation of the target compounds in a biological fluid to be achieved, thus increasing the biochip system’s sensitivity and even implementing a label-free design of the detection unit. The multilevel process of manufacturing a microfluidic system of a given topology for label-free fluorometric detection of protein structures is presented. The technological process included the chemical modification of the working surface of glass substrates by silanization using (3-aminopropyl) trimethoxysilane (APTMS), formation of the microchannels, for which SU-8 technologies and a last generation dry film photoresist were studied and compared. The solid-state phosphor layers were deposited using three methods: drop application; airbrushing; and mechanical spraying onto the adhesive surface. The processes of sealing the system, installing input ports, and packaging using micro-assembly technologies are described. The technological process has been optimized and the biochip was implemented and tested. The presented system can be used to design novel high-performance diagnostic tools that implement the function of express detection of protein markers of diseases and create low-power multimodal, highly intelligent portable analytical decision-making systems in medicine.

21 May 2022 in Diagnostics
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SKSergei Karpishchenko
Sergei Karpishchenko
OVOlga Vereshchagina
Olga Vereshchagina
OSOlga Stancheva
Olga Stancheva
TNTatiana V. Nagornykh
Tatiana V. Nagornykh
AKAlexander Krasichkov
Alexander Krasichkov
Dmitrii KaplunDmitrii Kaplun
Dmitrii Kaplun
Isolated sphenoid sinusitis (ISS) is a group of pathologies characterized by inflammation in one or both sphenoid sinuses. The gold standard for analyzing and diagnosing ISS is computer tomography. Many researchers have discussed the treatment of patients with ISS variants such as fully opacified sinus, mostly with surgery. A retrospective analysis of clinical data of 59 patients (21 male (35%), 38 female (65%)) with ISS, who were treated in the Otorhinolaryngological Department of Pavlov First Saint Petersburg State Medical University between January 2017 and January 2020, was conducted. All patients were in the first stage of the same medical therapy. In cases where there was no recovery, these patients were referred to surgery. For the control group, we analyzed patients without any disorders according to CT-scan examination. After analyzing the obtained clinical and radiological data, we found indicators that were common in patients who did not recover after medical therapy. According to the reverse regression method statistical model, in male patients with a diffuse headache and nasal discharge it was shown that medical therapy was highly effective (more than 78%). The presence of nasal septum deviation and adenoids in male and female patients leads to the highest risk of surgical treatment (83% probability of the logistic model). The detailed analysis of CT-scans and the complaints of patients with ISS can be the key to determining the preferred therapy choice. Not all cases need to have an endoscopic opening of the sphenoid sinus, according to our research.

21 August 2022 in Diagnostics
Verified
Journal Article
Open access
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MGMaria Gordeeva
Maria Gordeeva
ISIrina Serdiukova
Irina Serdiukova
AKAlexander Krasichkov
Alexander Krasichkov
EPElena Parmon
Elena Parmon
The aim of the study was to investigate the relationship between a decrease in the left ventricular ejection fraction (EF) and traditional ECG signs associated with structural changes of the myocardium (pathological Q wave, ventricular arrhythmias) and relatively new and poorly understood (fragmented QRS complex (fQRS), early repolarization pattern (ERP)) and evaluate their significance for identifying patients with mildly reduced EF (mrEF). The study included 148 patients who were treated and examined at the Almazov Medical Research Center. FQRS, ERP, pathological Q wave, and premature ventricular contractions (PVC) were described in the analysis of the ECG, and the results of echocardiography and statistical data were analyzed: Fisher’s test and chi-square, correlation analysis, and ROC analysis. According to the level of EF, patients were divided into three groups: group 1—patients with low EF (lEF) (less than 40%), group 2—patients with mildly reduced EF (mrEF) (40–49%); group 3—patients with preserved EF (pEF) (more than 50%). In the first group (EF), fQRS was registered in 16 (51.6%) patients, in the mrEF in 16 (18.2%). Pathological Q wave was detected in lEF in 20 (65%), in mrEF in 10 (35%), 15 (18%), in pEF in 15 (18%). The fQRS has been found to be more important in identifying patients with mrEF. In lEF in 2 (6.5%) patients, in mrEF in 2 (6.9%), in pEF in 11 (12.5%). There was no relationship between ERP, the amount of PVC, and the presence of ventricular tachycardia with EF. FQRS is significantly more common occurred with a decrease in EF and may be a marker of a mrEF. Thus, fQRS is associated with mrEF and pay close attention in routine clinical practice to identify patients at high risk of developing systolic dysfunction.