Dmitrii Kaplun

Dr. Dmitrii Kaplun

Saint Petersburg Electrotechnical University "LETI"
orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
15 July 2021 in Scientific Reports
Verified
Journal Article
Open access
PDF file
AMAnkur Manna
Ankur Manna
RKRohit Kundu
Rohit Kundu
Dmitrii KaplunDmitrii Kaplun
Dmitrii Kaplun
Aleksandr SinitcaAleksandr Sinitca
Aleksandr Sinitca
RSRam Sarkar
Ram Sarkar
Cervical cancer affects more than 0.5 million women annually causing more than 0.3 million deaths. Detection of cancer in its early stages is of prime importance for eradicating the disease from the patient’s body. However, regular population-wise screening of cancer is limited by its expensive and labour intensive detection process, where clinicians need to classify individual cells from a stained slide consisting of more than 100,000 cervical cells, for malignancy detection. Thus, Computer-Aided Diagnosis (CAD) systems are used as a viable alternative for easy and fast detection of cancer. In this paper, we develop such a method where we form an ensemble-based classification model using three Convolutional Neural Network (CNN) architectures, namely Inception v3, Xception and DenseNet-169 pre-trained on ImageNet dataset for Pap stained single cell and whole-slide image classification. The proposed ensemble scheme uses a fuzzy rank-based fusion of classifiers by considering two non-linear functions on the decision scores generated by said base learners. Unlike the simple fusion schemes that exist in the literature, the proposed ensemble technique makes the final predictions on the test samples by taking into consideration the confidence in the predictions of the base classifiers. The proposed model has been evaluated on two publicly available benchmark datasets, namely, the SIPaKMeD Pap Smear dataset and the Mendeley Liquid Based Cytology (LBC) dataset, using a 5-fold cross-validation scheme. On the SIPaKMeD Pap Smear dataset, the proposed framework achieves a classification accuracy of 98.55% and sensitivity of 98.52% in its 2-class setting, and 95.43% accuracy and 98.52% sensitivity in its 5-class setting. On the Mendeley LBC dataset, the accuracy achieved is 99.23% and sensitivity of 99.23%. The results obtained outperform many of the state-of-the-art models, thereby justifying the effectiveness of the same. The relevant codes of this proposed model are publicly available on GitHub.

1 June 2022 in Scientific Reports
Verified
Journal Article
Open access
PDF file
DMDebadyuti Mukherkjee
Debadyuti Mukherkjee
PSPritam Saha
Pritam Saha
Dmitrii KaplunDmitrii Kaplun
Dmitrii Kaplun
Aleksandr SinitcaAleksandr Sinitca
Aleksandr Sinitca
RSRam Sarkar
Ram Sarkar
In the recent past, deep learning-based models have achieved tremendous success in computer vision-related tasks with the help of large-scale annotated datasets. An interesting application of deep learning is synthetic data generation, especially in the domain of medical image analysis. The need for such a task arises due to the scarcity of original data. Class imbalance is another reason for applying data augmentation techniques. Generative Adversarial Networks (GANs) are beneficial for synthetic image generation in various fields. However, stand-alone GANs may only fetch the localized features in the latent representation of an image, whereas combining different GANs might understand the distributed features. To this end, we have proposed AGGrGAN, an aggregation of three base GAN models—two variants of Deep Convolutional Generative Adversarial Network (DCGAN) and a Wasserstein GAN (WGAN) to generate synthetic MRI scans of brain tumors. Further, we have applied the style transfer technique to enhance the image resemblance. Our proposed model efficiently overcomes the limitation of data unavailability and can understand the information variance in multiple representations of the raw images. We have conducted all the experiments on the two publicly available datasets - the brain tumor dataset and the Multimodal Brain Tumor Segmentation Challenge (BraTS) 2020 dataset. Results show that the proposed model can generate fine-quality images with maximum Structural Similarity Index Measure (SSIM) scores of 0.57 and 0.83 on the said two datasets.

8 May 2022 in Diagnostics
Verified
Journal Article
Open access
PDF file
AKAnkit Kurmi
Ankit Kurmi
SBSHREYA BISWAS
SHREYA BISWAS
SSShibaprasad Sen
Shibaprasad Sen
Aleksandr SinitcaAleksandr Sinitca
Aleksandr Sinitca
Dmitrii KaplunDmitrii Kaplun
Dmitrii Kaplun
RSRam Sarkar
Ram Sarkar
Parkinson’s Disease (PD) is a progressive central nervous system disorder that is caused due to the neural degeneration mainly in the substantia nigra in the brain. It is responsible for the decline of various motor functions due to the loss of dopamine-producing neurons. Tremors in hands is usually the initial symptom, followed by rigidity, bradykinesia, postural instability, and impaired balance. Proper diagnosis and preventive treatment can help patients improve their quality of life. We have proposed an ensemble of Deep Learning (DL) models to predict Parkinson’s using DaTscan images. Initially, we have used four DL models, namely, VGG16, ResNet50, Inception-V3, and Xception, to classify Parkinson’s disease. In the next stage, we have applied a Fuzzy Fusion logic-based ensemble approach to enhance the overall result of the classification model. The proposed model is assessed on a publicly available database provided by the Parkinson’s Progression Markers Initiative (PPMI). The achieved recognition accuracy, Precision, Sensitivity, Specificity, F1-score from the proposed model are 98.45%, 98.84%, 98.84%, 97.67%, and 98.84%, respectively which are higher than the individual model. We have also developed a Graphical User Interface (GUI)-based software tool for public use that instantly detects all classes using Magnetic Resonance Imaging (MRI) with reasonable accuracy. The proposed method offers better performance compared to other state-of-the-art methods in detecting PD. The developed GUI-based software tool can play a significant role in detecting the disease in real-time.

7 April 2023 in PLOS ONE
Verified
Journal Article
Open access
PDF file
RPRishav Pramanik
Rishav Pramanik
BBBihan Banerjee
Bihan Banerjee
GEGeorge Efimenko
George Efimenko
Dmitrii KaplunDmitrii Kaplun
Dmitrii Kaplun
RSRam Sarkar
Ram Sarkar
We have recently been witnessing that our society is starting to heal from the impacts of COVID-19. The economic, social and cultural impacts of a pandemic cannot be ignored and we should be properly equipped to deal with similar situations in future. Recently, Monkeypox has been concerning the international health community with its lethal impacts for a probable pandemic. In such situations, having appropriate protocols and methodologies to deal with the outbreak efficiently is of paramount interest to the world. Early diagnosis and treatment stand as the only viable option to tackle such problems. To this end, in this paper, we propose an ensemble learning-based framework to detect the presence of the Monkeypox virus from skin lesion images. We first consider three pre-trained base learners, namely Inception V3, Xception and DenseNet169 to fine-tune on a target Monkeypox dataset. Further, we extract probabilities from these deep models to feed into the ensemble framework. To combine the outcomes, we propose a Beta function-based normalization scheme of probabilities to learn an efficient aggregation of complementary information obtained from the base learners followed by the sum rule-based ensemble. The framework is extensively evaluated on a publicly available Monkeypox skin lesion dataset using a five-fold cross-validation setup to evaluate its effectiveness. The model achieves an average of 93.39%, 88.91%, 96.78% and 92.35% accuracy, precision, recall and F1 scores, respectively. The supporting source codes are presented in https://github.com/BihanBanerjee/MonkeyPox.

19 October 2021 in Scientific Reports
Verified
Journal Article
Open access
PDF file
ABAnkan Bhattacharyya
Ankan Bhattacharyya
SCSomnath Chatterjee
Somnath Chatterjee
SSShibaprasad Sen
Shibaprasad Sen
Aleksandr SinitcaAleksandr Sinitca
Aleksandr Sinitca
Dmitrii KaplunDmitrii Kaplun
Dmitrii Kaplun
RSRam Sarkar
Ram Sarkar
The analysis of human facial expressions from the thermal images captured by the Infrared Thermal Imaging (IRTI) cameras has recently gained importance compared to images captured by the standard cameras using light having a wavelength in the visible spectrum. It is because infrared cameras work well in low-light conditions and also infrared spectrum captures thermal distribution that is very useful for building systems like Robot interaction systems, quantifying the cognitive responses from facial expressions, disease control, etc. In this paper, a deep learning model calledIRFacExNet(InfraRedFacialExpressionNetwork) has been proposed for facial expression recognition (FER) from infrared images. It utilizes two building blocks namely Residual unit and Transformation unit which extract dominant features from the input images specific to the expressions. The extracted features help to detect the emotion of the subjects in consideration accurately. The Snapshot ensemble technique is adopted with a Cosine annealing learning rate scheduler to improve the overall performance. The performance of the proposed model has been evaluated on a publicly available dataset, namelyIRDatabasedeveloped by RWTH Aachen University. The facial expressions present in the dataset are Fear, Anger, Contempt, Disgust, Happy, Neutral, Sad, and Surprise. The proposed model produces 88.43% recognition accuracy, better than some state-of-the-art methods considered here for comparison. Our model provides a robust framework for the detection of accurate expression in the absence of visible light.

18 January 2022 in IEEE Access
Verified
Journal Article
Open access
Anastasiia SafonovaAnastasiia Safonova
Anastasiia Safonova
YHYousif A. Hamad
Yousif A. Hamad
AAAnna Alekhina
Anna Alekhina
Dmitrii KaplunDmitrii Kaplun
Dmitrii Kaplun
In recent years, massive outbreaks of the European spruce bark beetle ( Ips typographus , (L.)) have caused colossal harm to coniferous forests. The main solution for this problem is the timely prevention of the bark beetle spread, for which it is necessary to identify damaged trees in their early stages of infestation. Fortunately, high-resolution unmanned aerial vehicle (UAV) imagery together with modern detection models provide a high potential for addressing such issues. In this work, we evaluate and compare three You Only Look Once (YOLO) deep neural network architectures, namely YOLOv2, YOLOv3, and YOLOv4, in the task of detecting infested trees in UAV images. We built a new dataset for training and testing these models and used a pre-processing balance contrast enhancement technique (BCET) that improves the generalization capacity of the models. Our experiments show that YOLOv4 achieves particularly good results when applying the BCET pre-processing. The best test result when comparing YOLO models was obtained for YOLOv4 with the mean average precision up to 95%. As a result of applying artificial data augmentation, the improvement for models YOLOv2, YOLOv3, and YOLOv4 was 65.0%, 7.22%, and 3.19%, respectively.