Alina Grigor'eva

Dr. Alina Grigor'eva

Institute of Chemical Biology and Fundamental Medicine, Novosibirsk, Novosibirskaya Oblast’, Russia
orcid

Research Focus & Metrics

Academic Career Length

14Years (2013-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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15 June 2016 in PLOS ONE
Verified
Journal Article
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OBOlga E Bryzgunova
Olga E Bryzgunova
MZMarat M Zaripov
Marat M Zaripov
TSTatyana E Skvortsova
Tatyana E Skvortsova
ELEvgeny A Lekchnov
Evgeny A Lekchnov
AGAlina Grigor'eva
Alina Grigor'eva
PLPavel P Laktionov
Pavel P Laktionov
Recent studies suggest that extracellular vesicles may be the key to timely diagnosis and monitoring of genito-urological malignancies. In this study we investigated the composition and content of extracellular vesicles found in the urine of healthy donors and prostate cancer patients. Urine of 14 PCa patients and 20 healthy volunteers was clarified by low-speed centrifugation and total extracellular vesicles fraction was obtain by high-speed centrifugation. The exosome-enriched fraction was obtained by filtration of total extracellular vesicles through a 0.1 μm pore filter. Transmission electron microscopy showed that cell-free urine in both groups contained vesicles from 20 to 230 nm. Immunogold staining after ultrafiltration demonstrated that 95% and 90% of extracellular vesicles in healthy individuals and cancer patients, respectively, were exosomes. Protein, DNA and RNA concentrations as well as size distribution of extracellular vesicles in both fractions were analyzed. Only 75% of the total protein content of extracellular vesicles was associated with exosomes which amounted to 90–95% of all vesicles. Median DNA concentrations in total extracellular vesicles and exosome-enriched fractions were 18 pg/ml and 2.6 pg/ml urine, correspondingly. Urine extracellular vesicles carried a population of RNA molecules 25 nt to 200 nt in concentration of no more than 290 pg/ml of urine. Additionally, concentrations of miR-19b, miR-25, miR-125b, and miR-205 were quantified by qRT-PCR. MiRNAs were shown to be differently distributed between different fractions of extracellular vesicles. Detection of miR-19b versus miR-16 in total vesicles and exosome-enriched fractions achieved 100%/93% and 95%/79% specificity/sensitivity in distinguishing cancer patients from healthy individuals, respectively, demonstrating the diagnostic value of urine extracellular vesicles.

18 May 2013 in BioMetals
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Journal Article
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AGAlina Grigor'eva
Alina Grigor'eva
ISIrina Saranina
Irina Saranina
NTNina Tikunova
Nina Tikunova
ASAlexey Safonov
Alexey Safonov
NTNikolai Timoshenko
Nikolai Timoshenko
ERElena Ryabchikova
Elena Ryabchikova

1 June 2017 in Biochimie Open
Verified
Journal Article
Open access
Sergey SedykhSergey Sedykh
Sergey Sedykh
Lada PurvinshLada Purvinsh
Lada Purvinsh
AMArtem S. Monogarov
Artem S. Monogarov
EBEvgeniya E. Burkova
Evgeniya E. Burkova
AGAlina Grigor'eva
Alina Grigor'eva
GNGeorgy Nevinsky
Georgy Nevinsky
Exosomes are 40-100 nm nanovesicles containing RNA and different proteins. Exosomes containing proteins, lipids, mRNAs, and microRNAs are important in intracellular communication and immune function. Exosomes from different sources are usually obtained by combination of centrifugation and ultracentrifugation and according to published data can contain from a few dozens to thousands of different proteins. Crude exosome preparations from milk of eighteen horses were obtained for the first time using several standard centrifugations. Exosome preparations were additionally purified by FPLC gel filtration. Individual preparations demonstrated different profiles of gel filtration showing well or bad separation of exosome peaks and one or two peaks of co-isolating proteins and their complexes. According to the electron microscopy, well purified exosomes displayed a typical exosome-like size (30-100 nm) and morphology. It was shown that exosomes may have several different biological functions, but detection of their biological functions may vary significantly depending on the presence of exosome contaminating proteins and proteins directly into exosomes. Exosome proteins were identified before and after gel filtration by MALDI MS and MS/MS spectrometry of protein tryptic hydrolyzates derived by SDS PAGE and 2D electrophoresis. The results of protein identification were unexpected: one or two peaks co-isolating proteins after gel-filtration mainly contained kappa-, beta-, alpha-S1-caseins and its precursors, but these proteins were not found in well-purified exosomes. Well-purified exosomes contained from five to eight different major proteins: CD81, CD63 receptors, beta-lactoglobulin and lactadherin were common to all preparations, while actin, butyrophilin, lactoferrin, and xanthine dehydrogenase were found only in some of them. The article describes the morphology and the protein content of major horse milk exosomes for the first time. Our results on the decrease of major protein number identified in exosomal preparations after gel filtration may be important to the studies of biological functions of pure exosomes.

1 January 2016 in Biomeditsinskaya Khimiya
Verified
Journal Article
Closed access
AGAlina Grigor'eva
Alina Grigor'eva
STSvetlana Tamkovich
Svetlana Tamkovich
AEA.V. Eremina
A.V. Eremina
ATA.E. Tupikin
A.E. Tupikin
Marsel R. KabilovMarsel R. Kabilov
Marsel R. Kabilov
ERE.I. Ryabchikova
E.I. Ryabchikova
Exosomes represent a sort of extracellular vesicles, which transfer molecular signals in organism and possess markers of producing cells. Our study was aimed at search of exosomes in the tears of healthy humans, confirmation of their nature and examination of exosome morphological and molecular-biological characteristics. The tears (110-340 ml) were collected from 24 healthy donors (aged 46-60 years); individual probes were centrifuged at 20000 g for 15 min to pellet cell debris. The supernatants were examined in electron microscope using negative staining; and they were also used for isolation and purification of the exosomes by filtration (100 nm pore-size) and double ultracentrifugation (90 min at 100000 g, 4°C). The “pellets” were subjected to electron microscopy, immunolabeling. The RNA and DNA were isolated from the samples, and their sizes were evaluated by capillary electrophoresis, the concentration and localization of nucleic acids were determined. Sequencing of DNA was performed using MiSeq (“Illumina”, USA), data were analyzed using CLC GW 7.5 (“Qiagen”, USA). Sequences were mapped on human genome (hg19). Electron microscopy revealed in supernatants of the tears cell debris, spherical microparticles (20-40 nm), membrane vesicles and macromolecular aggregates. The “pellets” obtained after ultracentrifugation, contained microparticles (17%), spherical and cup-shaped EVs (40-100 nm, 83%), which were positive for CD63, CD9 and CD24 receptors (specific markers of exosomes). Our study showed presence of high amount of exosomes in human tears, and relation of the exosomes with RNA (size less than 200 nt) and DNA (size was 3-9 kb). Sequencing of the DNA showed that about 92% of the reads mapped to human genome.

1 August 2019 in Clinica Chimica Acta
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Journal Article
Closed access
STSvetlana Tamkovich
Svetlana Tamkovich
AGAlina Grigor'eva
Alina Grigor'eva
AEAlena Eremina
Alena Eremina
ATAlexey Tupikin
Alexey Tupikin
MKMarcel Kabilov
Marcel Kabilov
ERElena Ryabchikova
Elena Ryabchikova

1 April 2016 in Biochemistry (Moscow), Supplement Series B: Biomedical Chemistry
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Journal Article
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AGAlina Grigor'eva
Alina Grigor'eva
STSvetlana Tamkovich
Svetlana Tamkovich
AEA. V. Eremina
A. V. Eremina
ATA. E. Tupikin
A. E. Tupikin
Marsel R. KabilovMarsel R. Kabilov
Marsel R. Kabilov
ERElena Ryabchikova
Elena Ryabchikova
Exosomes represent a sort of extracellular vesicles, which transfer molecular signals in the body and contain markers of the exosome-producing cell. This study was aimed at search of exosomes in the...