Ali Diyapoglu

Dr. Ali Diyapoglu

Academia Sinica, Taipei, Taiwan
+1
orcid

Research Focus & Metrics

Academic Career Length

10Years (2017-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 April 2017 in Oral Oncology
Verified
Journal Article
Closed access
OKOmer Faruk Karatas
Omer Faruk Karatas
MOMuhammet Oner
Muhammet Oner
AAAlican Abay
Alican Abay
ADAli Diyapoglu
Ali Diyapoglu

7 July 2022 in Molecules
Verified
Journal Article
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ADAli Diyapoglu
Ali Diyapoglu
MOMuhammet Oner
Muhammet Oner
Menghsiao MengMenghsiao Meng
Menghsiao Meng
Plant-parasitic nematodes (PPNs) constitute the most damaging group of plant pathogens. Plant infections by root-knot nematodes (RKNs) alone could cause approximately 5% of global crop loss. Conventionally, chemical-based methods are used to control PPNs at the expense of the environment and human health. Accordingly, the development of eco-friendly and safer methods has been urged to supplement or replace chemical-based methods for the control of RKNs. Using microorganisms or their metabolites as biological control agents (BCAs) is a promising approach to controlling RKNs. Among the metabolites, volatile organic compounds (VOCs) have gained increasing attention because of their potential in the control of not only RKNs but also other plant pathogens, such as insects, fungi, and bacteria. This review discusses the biology of RKNs as well as the status of various control strategies. The discovery of VOCs emitted by bacteria from various environmental sources and their application potential as BCAs in controlling RKNs are specifically addressed.

23 July 2022 in Molecules
Verified
Journal Article
Open access
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ADAli Diyapoglu
Ali Diyapoglu
TCTao-Ho Chang
Tao-Ho Chang
PCPi-Fang Linda Linda Chang
Pi-Fang Linda Linda Chang
JYJyh-Herng Yen
Jyh-Herng Yen
Hsin-I Sam ChiangHsin-I Sam Chiang
Hsin-I Sam Chiang
Menghsiao MengMenghsiao Meng
Menghsiao Meng
Plant-parasitic nematodes infect a diversity of crops, resulting in severe economic losses in agriculture. Microbial volatile organic compounds (VOCs) are potential agents to control plant-parasitic nematodes and other pests. In this study, VOCs emitted by a dozen bacterial strains were analyzed using solid-phase microextraction followed by gas chromatography–mass spectrometry. Fumigant toxicity of selected VOCs, including dimethyl disulfide (DMDS), 2-butanone, 2-pentanone, 2-nonanone, 2-undecanone, anisole, 2,5-dimethylfuran, glyoxylic acid, and S-methyl thioacetate (MTA) was then tested against Caenorhabditis elegans. DMDS and MTA exhibited much stronger fumigant toxicity than the others. Probit analysis suggested that the values of LC50 were 8.57 and 1.43 μg/cm3 air for DMDS and MTA, respectively. MTA also showed stronger fumigant toxicity than DMDS against the root-knot nematode Meloidogyne incognita, suggesting the application potential of MTA.

22 December 2025 in Antibiotics
Verified
Journal Article
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ADAli Diyapoglu
Ali Diyapoglu
AAAlican Abay
Alican Abay
Menghsiao MengMenghsiao Meng
Menghsiao Meng
Burkholderia is a metabolically versatile genus of Gram-negative bacteria that inhabits niches ranging from soil and water to plants and clinical environments. This review provides an integrated examination of Burkholderia species, focusing on their dual roles as both pathogens and beneficial microorganisms. Key pathogenic species, such as members of the Burkholderia cepacia complex and the Burkholderia pseudomallei group, pose significant threats to human, animal, and plant health due to their intrinsic antibiotic resistance and diverse virulence factors. Conversely, several environmental and plant-associated Burkholderia species promote plant growth, enhance nutrient uptake, and serve as biocontrol agents, supporting sustainable agriculture. We synthesize current knowledge across taxonomy, genomics, pathogenicity, beneficial interactions, and secondary metabolite biosynthesis—including the prolific production of antibiotics, toxins, and volatile organic compounds with pharmaceutical and agricultural potential. Advances in high-throughput genomics are revealing substantial genetic diversity, genome plasticity, and mechanisms underlying both pathogenicity and beneficial traits. Clarifying this dual nature and identifying strategies to mitigate risks will guide the safe and effective exploitation of Burkholderia in medicine, agriculture, and biotechnology.