Jaunius Urbonavičius

Dr. Jaunius Urbonavičius

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Research Focus & Metrics

Academic Career Length

20Years (2007-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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26 September 2023 in Microorganisms
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AJAugusta Jankutė
Augusta Jankutė
Viktor GribniakViktor Gribniak
Viktor Gribniak
RJRonaldas Jakubovskis
Ronaldas Jakubovskis
Jaunius UrbonavičiusJaunius Urbonavičius
Jaunius Urbonavičius
Cracking is an inevitable feature of concrete, typically leading to corrosion of the embedded steel reinforcement and massive deterioration because of the freezing–thawing cycles. Different means have been proposed to increase the serviceability performance of cracked concrete structures. This case study deals with bacteria encapsulated in cementitious materials to “heal” cracks. Such a biological self-healing system requires preserving the bacteria’s viability in the cement matrix. Many embedded bacterial spores are damaged during concrete curing, drastically reducing efficiency. This study investigates the viability of commonly used non-ureolytic bacterial spores when immobilized in calcium alginate microcapsules within self-healing cementitious composites. Three Bacillus species were used in this study, i.e., B. pseudofirmus, B. cohnii, and B. halodurans. B. pseudofirmus demonstrated the best mineralization activity; a sufficient number of bacterial spores remained viable after the encapsulation. B. pseudofirmus and B. halodurans spores retained the highest viability after incorporating the microcapsules into the cement paste, while B. halodurans spores retained the highest viability in the mortar. Cracks with a width of about 0.13 mm were filled with bacterial calcium carbonate within 14 to 28 days, depending on the type of bacteria. Larger cracks were not healed entirely. B. pseudofirmus had the highest efficiency, with a healing coefficient of 0.497 after 56 days. This study also revealed the essential role of the cement hydration temperature on bacterial viability. Thus, further studies should optimize the content of bacteria and nutrients in the microcapsule structure.

15 October 2021 in Nanomaterials
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SMSeyedehmaryam Moosavi
Seyedehmaryam Moosavi
Otilia MantaOtilia Manta
Otilia Manta
YEYaser El-Badry
Yaser El-Badry
EHEnas Hussein
Enas Hussein
ZEZeinhom M. ElBahy
Zeinhom M. ElBahy
SMSeyed Mohammad Hossein Moosavi
Seyed Mohammad Hossein Moosavi
The adsorption of dyes using 39 adsorbents (16 kinds of agro-wastes) were modeled using random forest (RF), decision tree (DT), and gradient boosting (GB) models based on 350 sets of adsorption experimental data. In addition, the correlation between variables and their importance was applied. After comprehensive feature selection analysis, five important variables were selected from nine variables. The RF with the highest accuracy (R2 = 0.9) was selected as the best model for prediction of adsorption capacity of agro-waste using the five selected variables. The results suggested that agro-waste characteristics (pore volume, surface area, agro-waste pH, and particle size) accounted for 50.7% contribution for adsorption efficiency. The pore volume and surface area are the most important influencing variables among the agro-waste characteristics, while the role of particle size was inconspicuous. The accurate ability of the developed models’ prediction could significantly reduce experimental screening efforts, such as predicting the dye removal efficiency of agro-waste activated carbon according to agro-waste characteristics. The relative importance of variables could provide a right direction for better treatments of dyes in the real wastewater.

22 April 2007 in Nucleic Acids Research
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Jaunius UrbonavičiusJaunius Urbonavičius
Jaunius Urbonavičius
GJGunilla Jäger
Gunilla Jäger
GBGlenn R. Björk
Glenn R. Björk
The Escherichia coli trmA gene encodes the tRNA(m5U54)methyltransferase, which catalyses the formation of m5U54 in tRNA. During the synthesis of m5U54, a covalent 62-kDa TrmA-tRNA intermediate is formed between the amino acid C324 of the enzyme and the 6-carbon of uracil. We have analysed the formation of this TrmA-tRNA intermediate and m5U54 in vivo, using mutants with altered TrmA. We show that the amino acids F188, Q190, G220, D299, R302, C324 and E358, conserved in the C-terminal catalytic domain of several RNA(m5U)methyltransferases of the COG2265 family, are important for the formation of the TrmA-tRNA intermediate and/or the enzymatic activity. These amino acids seem to have the same function as the ones present in the catalytic domain of RumA, whose structure is known, and which catalyses the formation of m5U in position 1939 of E. coli 23 S rRNA. We propose that the unusually high in vivo level of the TrmA-tRNA intermediate in wild-type cells may be due to a suboptimal cellular concentration of SAM, which is required to resolve this intermediate. Our results are consistent with the modular evolution of RNA(m5U)methyltransferases, in which the specificity of the enzymatic reaction is achieved by combining the conserved catalytic domain with different RNA-binding domains.

28 May 2020 in Applied Sciences
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SBSaloua Biyada
Saloua Biyada
MMMERZOUKI MOHAMMED MERZOUKI MOHAMMED
MERZOUKI MOHAMMED MERZOUKI MOHAMMED
TDTaisija Demchenko
Taisija Demchenko
DVDovile Vasiliauskiene
Dovile Vasiliauskiene
Jaunius UrbonavičiusJaunius Urbonavičius
Jaunius Urbonavičius
MBMohamed Benlemlih
Mohamed Benlemlih
The production of stable and mature compost often depends on the performance of microbes and their enzymatic activity. Environmental and nutritional conditions influence the characteristics of microbial communities and, therefore, the dynamics of major metabolic activities. Using three waste mixtures (textile waste mixed with either green, paper, or cardboard waste), the maturity of the compost produced was assessed by following the physico-chemical parameters and enzymatic activities provided by the microorganisms that were identified using next-generation sequencing (NGS). Among the three mixtures used, it was found that the two best mixtures showed C/N ratios of 16.30 and 16.96, total nitrogen of 1.37 and 1.39%, cellulase activities of 50.62 and 52.67 Ug−1, acid phosphatase activities of 38.81 and 68.77 Ug−1, and alkaline phosphatase activities of 51.12 and 56.86 Ug−1. In addition, several lignocellulosic species, together with those that are able to solubilize phosphate, were identified. Among those known for cellulase and acid/alkaline phosphatase activities, bacteria belonging to the Proteobacteria, Bacteroidetes, Actinobacteria, and Firmicutes phyla were shown. The presence of species belonging to the Ascomycota and Basidiomycota phyla of Fungi, which are known for their ability to produce cellulase and acid/alkaline phosphatases, was demonstrated. These findings provide a basis for the production of stable and mature compost based on textile waste.

21 May 2021 in Materials
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RJRonaldas Jakubovskis
Ronaldas Jakubovskis
AJAugusta Jankutė
Augusta Jankutė
SGSimona Guobužaitė
Simona Guobužaitė
Renata BorisRenata Boris
Renata Boris
Jaunius UrbonavičiusJaunius Urbonavičius
Jaunius Urbonavičius
One of the biggest challenges in the development of a biological self-healing concrete is to ensure the long-term viability of bacteria that are embedded in the concrete. In the present study, a coated expanded clay (EC) is investigated for its potential use as a bacterial carrier in biological concrete. Eight different materials for coatings were selected considering cost, workability and accessibility in the construction industry. Long-term (56 days) viability analysis was conducted with a final evaluation of each coating performance. Our results indicate that healing efficiency in biological concrete specimens is strongly related to viable bacteria present in the healing agent. More viable bacteria-containing specimens exhibited a higher crack closure ratio. Our data suggest that the additional coating of EC particles improves long-term bacterial viability and, consequently, provides efficient crack healing in biological concrete.

7 September 2023 in Processes
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SBSaloua Biyada
Saloua Biyada
MMMERZOUKI MOHAMMED MERZOUKI MOHAMMED
MERZOUKI MOHAMMED MERZOUKI MOHAMMED
Jaunius UrbonavičiusJaunius Urbonavičius
Jaunius Urbonavičius
Energy conservation has emerged as a strategic target worldwide, which will enable the protection of the environment and the preservation of natural resources. Energy consumption in buildings for heating and cooling is considered one of the main sources of energy consumption in several countries. For this reason, there is an ongoing search for appropriate alternatives to preserve energy and reduce energy losses. To overcome this challenge, thermal insulation is becoming increasingly essential to save energy. Although a large number of insulation materials are used commercially, this sector still faces various challenges such as cost, thermal and mechanical properties, the end-of-life cycle, as well as health issues, etc. Furthermore, the harmful impact of buildings on the environment and health issues should be considered not only in relation to the energy expended whilst using them but also in relation to the energy performance materials they are constructed from. The insulation materials commonly used in the construction industry today are polymer-based materials such as polystyrene and polyurethane foam. These materials have a critical impact on the environment. In light of these results, several researchers have concluded that it is imperative to develop insulating materials with outstanding properties that have a lower impact on the environment and are relatively affordable. Agricultural and/or industrial wastes, and even natural fibers, are increasingly used as green insulation materials, as they are an eco-friendly, cost-effective alternative to conventional oil-based materials, as well as the fact that their end-of-life cycle does not pose a critical problem. This review paper discusses the several renewable resources and industrial wastes developed as thermal insulations. Furthermore, it sheds light on composite materials used as construction materials, as well as their end-of-life cycle.