This work aims at studying the techno-economic feasibility to produce an extract, at a small industrial-production scale, from a Tisochrysis lutea’s paste, in view of cosmetic applications. The paste was first thawed, diluted and centrifuged to get a crude water extract. Then, two successive stages of membrane filtration were carried out: the first one to essentially remove/retain the particles (cellular debris) by microfiltration and the second one to concentrate (ultrafiltration) the soluble compounds of the permeate from the previous step. The robustness of the processing chain has been demonstrated following the production of three similar extracts with more than 30 L input material each. Around 54% of the final extract was composed of proteins and carbohydrates. The final ingredient was assessed for genomic activity and showed multiple positive responses. Finally, an economic analysis was performed, which demonstrated that the major cost is linked to centrifugation step. The total manpower represents the highest cost of the OPEX categories.