Farman Ali

Dr. Farman Ali

orcid

Research Focus & Metrics

Academic Career Length

13Years (2014-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

View All Publications
21 March 2023 in Frontiers in Plant Science
Verified
Journal Article
Open access
MSMuhammad Shoaib
Muhammad Shoaib
BSBabar Shah
Babar Shah
SEShaker Ei-Sappagh
Shaker Ei-Sappagh
AAAkhtar Ali
Akhtar Ali
AUAsad Ullah
Asad Ullah
FAFarman Ali
Farman Ali
Plants play a crucial role in supplying food globally. Various environmental factors lead to plant diseases which results in significant production losses. However, manual detection of plant diseases is a time-consuming and error-prone process. It can be an unreliable method of identifying and preventing the spread of plant diseases. Adopting advanced technologies such as Machine Learning (ML) and Deep Learning (DL) can help to overcome these challenges by enabling early identification of plant diseases. In this paper, the recent advancements in the use of ML and DL techniques for the identification of plant diseases are explored. The research focuses on publications between 2015 and 2022, and the experiments discussed in this study demonstrate the effectiveness of using these techniques in improving the accuracy and efficiency of plant disease detection. This study also addresses the challenges and limitations associated with using ML and DL for plant disease identification, such as issues with data availability, imaging quality, and the differentiation between healthy and diseased plants. The research provides valuable insights for plant disease detection researchers, practitioners, and industry professionals by offering solutions to these challenges and limitations, providing a comprehensive understanding of the current state of research in this field, highlighting the benefits and limitations of these methods, and proposing potential solutions to overcome the challenges of their implementation.

7 October 2022 in Frontiers in Plant Science
Verified
Journal Article
Open access
MSMuhammad Shoaib
Muhammad Shoaib
Tariq HussainTariq Hussain
Tariq Hussain
BSBabar Shah
Babar Shah
IUIhsan Ullah
Ihsan Ullah
SSSayyed Mudassar Shah
Sayyed Mudassar Shah
Sang Hyun ParkSang Hyun Park
Sang Hyun Park
Plants contribute significantly to the global food supply. Various Plant diseases can result in production losses, which can be avoided by maintaining vigilance. However, manually monitoring plant diseases by agriculture experts and botanists is time-consuming, challenging and error-prone. To reduce the risk of disease severity, machine vision technology (i.e., artificial intelligence) can play a significant role. In the alternative method, the severity of the disease can be diminished through computer technologies and the cooperation of humans. These methods can also eliminate the disadvantages of manual observation. In this work, we proposed a solution to detect tomato plant disease using a deep leaning-based system utilizing the plant leaves image data. We utilized an architecture for deep learning based on a recently developed convolutional neural network that is trained over 18,161 segmented and non-segmented tomato leaf images—using a supervised learning approach to detect and recognize various tomato diseases using the Inception Net model in the research work. For the detection and segmentation of disease-affected regions, two state-of-the-art semantic segmentation models, i.e., U-Net and Modified U-Net, are utilized in this work. The plant leaf pixels are binary and classified by the model as Region of Interest (ROI) and background. There is also an examination of the presentation of binary arrangement (healthy and diseased leaves), six-level classification (healthy and other ailing leaf groups), and ten-level classification (healthy and other types of ailing leaves) models. The Modified U-net segmentation model outperforms the simple U-net segmentation model by 98.66 percent, 98.5 IoU score, and 98.73 percent on the dice. InceptionNet1 achieves 99.95% accuracy for binary classification problems and 99.12% for classifying six segmented class images; InceptionNet outperformed the Modified U-net model to achieve higher accuracy. The experimental results of our proposed method for classifying plant diseases demonstrate that it outperforms the methods currently available in the literature.

20 April 2021 in IEEE Access
Verified
Journal Article
Open access
ZKZubair Khan
Zubair Khan
FKFiaz Khan
Fiaz Khan
Ahmad Khan ShazliAhmad Khan Shazli
Ahmad Khan Shazli
ZRZia Ur Rehman
Zia Ur Rehman
SSSajid Shah
Sajid Shah
Sangheon PackSangheon Pack
Sangheon Pack
Diabetic retinopathy (DR) is a disease that damages retinal blood vessels and leads to blindness. Usually, colored fundus shots are used to diagnose this irreversible disease. The manual analysis (by clinicians) of the mentioned images is monotonous and error-prone. Hence, various computer vision hands-on engineering techniques are applied to predict the occurrences of the DR and its stages automatically. However, these methods are computationally expensive and lack to extract highly nonlinear features and, hence, fail to classify DR's different stages effectively. This paper focuses on classifying the DR's different stages with the lowest possible learnable parameters to speed up the training and model convergence. The VGG16, spatial pyramid pooling layer (SPP) and network-in-network (NiN) are stacked to make a highly nonlinear scale-invariant deep model called the VGG-NiN model. The proposed VGG-NiN model can process a DR image at any scale due to the SPP layer's virtue. Moreover, the stacking of NiN adds extra nonlinearity to the model and tends to better classification. The experimental results show that the proposed model performs better in terms of accuracy, computational resource utilization compared to state-of-the-art methods.

21 February 2025 in Frontiers in Plant Science
Verified
Journal Article
Open access
PDF file
MSMuhammad Shoaib
Muhammad Shoaib
ASAbolghasem Sadeghi-Niaraki
Abolghasem Sadeghi-Niaraki
FAFarman Ali
Farman Ali
IHIrfan Hussain
Irfan Hussain
SKShah Khalid
Shah Khalid
Plant diseases and pests pose significant threats to crop yield and quality, prompting the exploration of digital image processing techniques for their detection. Recent advancements in deep learning models have shown remarkable progress in this domain, outperforming traditional methods across various fronts including classification, detection, and segmentation networks. This review delves into recent research endeavors focused on leveraging deep learning for detecting plant and pest diseases, reflecting a burgeoning interest among researchers in artificial intelligence-driven approaches for agricultural analysis. The study begins by elucidating the limitations of conventional detection methods, setting the stage for exploring the challenges and opportunities inherent in deploying deep learning in real-world applications for plant disease and pest infestation detection. Moreover, the review offers insights into potential solutions while critically analyzing the obstacles encountered. Furthermore, it conducts a meticulous examination and prognostication of the trajectory of deep learning models in plant disease and pest infestation detection. Through this comprehensive analysis, the review seeks to provide a nuanced understanding of the evolving landscape and prospects in this vital area of agricultural research. The review highlights that state-of-the-art deep learning models have achieved impressive accuracies, with classification tasks often exceeding 95% and detection and segmentation networks demonstrating precision rates above 90% in identifying plant diseases and pest infestations. These findings underscore the transformative potential of deep learning in revolutionizing agricultural diagnostics.

1 March 2021 in Accident Analysis & Prevention
Verified
Journal Article
Closed access
FAFarman Ali
Farman Ali
AAAmjad Ali
Amjad Ali
MIMuhammad Imran
Muhammad Imran
Rizwan Ali NaqviRizwan Ali Naqvi
Rizwan Ali Naqvi
MSMuhammad Hameed Siddiqi
Muhammad Hameed Siddiqi
KKKyung Sup Kwak
Kyung Sup Kwak

31 August 2018 in BMC Medical Informatics and Decision Making
Verified
Journal Article
Open access
PDF file
SEShaker EL-Sappagh
Shaker EL-Sappagh
FFFrancesco Franda
Francesco Franda
FAFarman Ali
Farman Ali
KKKyung Sup Kwak
Kyung Sup Kwak
Systematized Nomenclature of Medicine—Clinical Terms (SNOMED CT, hereafter abbreviated SCT) is a comprehensive medical terminology used for standardizing the storage, retrieval, and exchange of electronic health data. Some efforts have been made to capture the contents of SCT as Web Ontology Language (OWL), but these efforts have been hampered by the size and complexity of SCT. Our proposal here is to develop an upper-level ontology and to use it as the basis for defining the terms in SCT in a way that will support quality assurance of SCT, for example, by allowing consistency checks of definitions and the identification and elimination of redundancies in the SCT vocabulary. Our proposed upper-level SCT ontology (SCTO) is based on the Ontology for General Medical Science (OGMS). The SCTO is implemented in OWL 2, to support automatic inference and consistency checking. The approach will allow integration of SCT data with data annotated using Open Biomedical Ontologies (OBO) Foundry ontologies, since the use of OGMS will ensure consistency with the Basic Formal Ontology, which is the top-level ontology of the OBO Foundry. Currently, the SCTO contains 304 classes, 28 properties, 2400 axioms, and 1555 annotations. It is publicly available through the bioportal at . The resulting ontology can enhance the semantics of clinical decision support systems and semantic interoperability among distributed electronic health records. In addition, the populated ontology can be used for the automation of mobile health applications.