João Fernando Marques Silva

Dr. João Fernando Marques Silva

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Research Focus & Metrics

Academic Career Length

16Years (2011-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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FBFlávia Raquel Bender
Flávia Raquel Bender
LALeonardo Alves
Leonardo Alves
JSJoão Fernando Marques Silva
João Fernando Marques Silva
RRRenan Augusto Ribeiro
Renan Augusto Ribeiro
GPGiuliano Pauli
Giuliano Pauli
Mariangela HungriaMariangela Hungria
Mariangela Hungria
Biological nitrogen fixation (BNF) is a key process for the N input in agriculture, with outstanding economic and environmental benefits from the replacement of chemical fertilizers. However, not all symbioses are equally effective in fixing N2, and a major example relies on the high contribution associated with the soybean (Glycine max), contrasting with the low rates reported with the common bean (Phaseolus vulgaris) crop worldwide. Understanding these differences represents a major challenge that can help to design strategies to increase the contribution of BNF, and next-generation sequencing (NGS) analyses of the nodule and root microbiomes may bring new insights to explain differential symbiotic performances. In this study, three treatments evaluated in non-sterile soil conditions were investigated in both legumes: (i) non-inoculated control; (ii) inoculated with host-compatible rhizobia; and (iii) co-inoculated with host-compatible rhizobia and Azospirillum brasilense. In the more efficient and specific symbiosis with soybean, Bradyrhizobium presented a high abundance in nodules, with further increases with inoculation. Contrarily, the abundance of the main Rhizobium symbiont was lower in common bean nodules and did not increase with inoculation, which may explain the often-reported lack of response of this legume to inoculation with elite strains. Co-inoculation with Azospirillum decreased the abundance of the host-compatible rhizobia in nodules, probably because of competitiveness among the species at the rhizosphere, but increased in root microbiomes. The results showed that several other bacteria compose the nodule microbiomes of both legumes, including nitrogen-fixing, growth-promoters, and biocontrol agents, whose contribution to plant growth deserves further investigation. Several genera of bacteria were detected in root microbiomes, and this microbial community might contribute to plant growth through a variety of microbial processes. However, massive inoculation with elite strains should be better investigated, as it may affect the root microbiome, verified by both relative abundance and diversity indices, that might impact the contribution of microbial processes to plant growth.

27 February 2023 in Ecology
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LTLívia Helena Tonella
Lívia Helena Tonella
RRRenata Ruaro
Renata Ruaro
VDVanessa Salete Daga
Vanessa Salete Daga
DGDiego Azevedo Zoccal Garcia
Diego Azevedo Zoccal Garcia
OVOscar Barroso Vitorino
Oscar Barroso Vitorino
ZLZilda Margarete Seixas de Lucena
Zilda Margarete Seixas de Lucena

6 January 2020 in Environmental Health Insights
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KNKauani Larissa Campana Nascimento
Kauani Larissa Campana Nascimento
JSJoão Fernando Marques Silva
João Fernando Marques Silva
JZJOAO ANTONIO ZEQUI
JOAO ANTONIO ZEQUI
JLJosé Lopes
José Lopes
Aedes (Stegomyia) aegypti (Linnaeus, 1762) is one of the world’s most widely distributed mosquitoes and is the vector of the dengue virus, one of the most important reemerging diseases. Besides dengue, A. aegypti can also transmit urban yellow fever, chikungunya, and Zika virus, making it of great medical importance. Thus, it is of extreme importance to find reliable methods to evaluate the presence of A. aegypti in urban areas. In Brazil, rapid index surveys of Aedes aegypti by means of larval survey (LIRAa) is the official method to estimate the Breteau (BI) and property infestation (PII) indexes, which indicates how many infested containers with larvae of A. aegypti were found by the total number of properties surveyed and the proportion of houses infested, respectively. As the LIRAa requires access to private residences and trained personal to find breeding sites and do not reveal the mosquito’s presence when in low density, it has not demonstrated efficacy in determining the presence of A. aegypti. To evaluate an alternative method, the LIRAa method was compared with an oviposition trap, made with hay infusion and a hardboard pallet, to evaluate the BI and the PII. The 2 methods were carried out simultaneously through 4 surveys, sampling 60 homes per survey. To evaluate the best configuration of ovitraps for surveillance of A. aegypti, the ovitraps were installed in intradomicile and peridomicile areas, with 1 to 5 traps per residence and with 1 to 3 pallets per trap, and these different configurations were compared using the positive ovitrap index (POI) and egg density index (EDI). The ovitraps showed greater sensitivity for detecting the presence of A. aegypti, with a BI of 72.5% and PII of 54.2%, whereas the LIRAa revealed only 2.1% for the BI and 1.3% for the PII. Therefore, the use of sentinel traps can provide information in a more rapid and precise manner. As there were no differences in the ovitraps distributions patterns, the ovitraps can be installed in the peridomicile area, with 2 traps per surveillance point and 1 pallet per trap, making their installation easier and more cost-efficient, facilitating the work of health agents in future surveillances complementing LIRAa’s actions for efficient monitoring.

1 September 2013 in Biota Neotropica
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JSJoão Fernando Marques Silva
João Fernando Marques Silva
CRCibele Bender Raio
Cibele Bender Raio
DBDébora Fernandes Silva Bernardino
Débora Fernandes Silva Bernardino
SBSirlei Terezinha Bennemann
Sirlei Terezinha Bennemann
The aim of this study was to verify structure patterns in fish assemblages in mountain streams of the Rio Tibagi basin through the characterization of spatial and temporal variations in the composition of fish species. Samples were collected in three segments of the Varanal, João Pinheiro and Rio Preto streams. We collected 1154 specimens belonging to 21 species. The most abundant orders were Characiformes (59.01 ± 2.84%) and Siluriformes (39.34 ± 2.82%). Phalloceros harpagos was the most abundant species with 433 individuals, followed by Trichomycterus aff. davisi, with 292 individuals. No temporal variations (between seasons) were detected, but the cluster analysis suggests a separation of species composition between the segments closer to the headwaters and those more distant. The first two axes of the Canonical Correspondence Analysis (CCA) explained 80.09% of the variation in species abundance, and the variables that structured the fish assemblages in those streams were the stream width, depth, water speed, flow rate, conductivity and pH.

22 June 2017 in Botanical Journal of the Linnean Society
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SGSara Mataroli De Godoy
Sara Mataroli De Godoy
JSJoão Fernando Marques Silva
João Fernando Marques Silva
GPGabriela Barbosa Navarro De Paula
Gabriela Barbosa Navarro De Paula
PRPaulo Maurício Ruas
Paulo Maurício Ruas
BGBruna Delgado Góes
Bruna Delgado Góes
CRClaudete De Fátima Ruas
Claudete De Fátima Ruas
Mikania (Eupatorieae, Asteraceae), with a pantropical distribution, has a highly defined and constant set of floral characters leading to its treatment as the sole representative of subtribe Mikaniinae. Several infrageneric classifications have been proposed for the genus, the last carried out in Brazil, where c. 204 species, mostly distributed in the Atlantic Forest domain, have been described. Studies of Mikania are scarce and, when available, the focus is only on species description. Reports on phylogenetic analysis of the genus are lacking. Here we used AFLP markers, nuclear (ITS and ETS) and plastid (rps16 intron) sequences to investigate the phylogenetic relationships of a group of species representing the taxonomic sections proposed for Brazilian Mikania spp. Analysis based on Bayesian inference and maximum likelihood showed no support for the proposed infrageneric classification based on morphological characters. Nonetheless, molecular data revealed the existence of two evolutionary lineages for the genus. Mikania micrantha was shown to be non-monophyletic. Divergence time estimation suggested the emergence of two main evolutionary lineages c. 6.0 My, during the Miocene. However, the processes of species diversification may have intensified due to climate change during the Pleistocene.

27 April 2022 in Botanical Journal of the Linnean Society
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DFDaniele Cassiano Feliciano
Daniele Cassiano Feliciano
SGSara Mataroli De Godoy
Sara Mataroli De Godoy
JSJoão Fernando Marques Silva
João Fernando Marques Silva
BGBruna Delgado Góes
Bruna Delgado Góes
JFJosé Roberto Ferraz
José Roberto Ferraz
CRClaudete De Fátima Ruas
Claudete De Fátima Ruas
Portulaca hatschbachii is endemic to the basaltic rocky outcrops that are distributed, in a discontinuous way, along the Third Plateau of Paraná State, Brazil, composing environments that form the Subtropical Highland Grasslands of the Atlantic Forest Biome. Considering the risk of extinction of the species and the massive anthropization of these outcrops, we applied AFLP, ITS and rps16 molecular markers in ten populations throughout the area of occurrence of the species to generate information about the genetic status of P. hatschbachii and contribute to the development of conservation strategies. Low rates of genetic diversity, high population structure, restricted gene flow and the presence of diversifying selection were observed for the populations. The analysis of variation partitioning (R2adj. = 63.60%) showed that environmental variables have a greater influence on the distribution of variation of loci under selection (R2adj. = 26.70%) than geographical isolation (R2adj. = 1.20%). The strong population structure, for both neutral and selected loci, suggests an isolation by adaptation mechanism (IBA) occurring in populations and highlights the need and urgency for in situ conservation plans for the species and its occurrence on rocky outcrops.