Dimitrios Floudas

Dr. Dimitrios Floudas


Research Focus & Metrics

Academic Career Length

12Years (2015-Present)

(Calculated once Scilit publication data is synced: current year − year of first publication + 1)

Representative Publications

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1 September 2017 in Fungal Biology
Verified
Journal Article
Closed access
AJAlfredo Justo
Alfredo Justo
OMOtto Miettinen
Otto Miettinen
DFDimitrios Floudas
Dimitrios Floudas
BOBeatriz Ortiz-Santana
Beatriz Ortiz-Santana
ESElisabet Sjökvist
Elisabet Sjökvist
DHDavid S. Hibbett
David S. Hibbett


1 March 2015 in Fungal Genetics and Biology
Verified
Journal Article
Closed access
DFDimitrios Floudas
Dimitrios Floudas
BHBenjamin Held
Benjamin Held
RRRobert Riley
Robert Riley
LNLaszlo G. Nagy
Laszlo G. Nagy
GKGage Koehler
Gage Koehler
DHDavid S. Hibbett
David S. Hibbett

7 May 2020 in The ISME Journal
Verified
Journal Article
Open access
PDF file
DFDimitrios Floudas
Dimitrios Floudas
JBJohan Bentzer
Johan Bentzer
DADag Ahrén
Dag Ahrén
TJTomas Johansson
Tomas Johansson
PPPer Persson
Per Persson
ATAnders Tunlid
Anders Tunlid
Litter decomposing Agaricales play key role in terrestrial carbon cycling, but little is known about their decomposition mechanisms. We assembled datasets of 42 gene families involved in plant-cell-wall decomposition from seven newly sequenced litter decomposers and 35 other Agaricomycotina members, mostly white-rot and brown-rot species. Using sequence similarity and phylogenetics, we split the families into phylogroups and compared their gene composition across nutritional strategies. Subsequently, we used Raman spectroscopy to examine the ability of litter decomposers, white-rot fungi, and brown-rot fungi to decompose crystalline cellulose. Both litter decomposers and white-rot fungi share the enzymatic cellulose decomposition, whereas brown-rot fungi possess a distinct mechanism that disrupts cellulose crystallinity. However, litter decomposers and white-rot fungi differ with respect to hemicellulose and lignin degradation phylogroups, suggesting adaptation of the former group to the litter environment. Litter decomposers show high phylogroup diversity, which is indicative of high functional versatility within the group, whereas a set of white-rot species shows adaptation to bulk-wood decomposition. In both groups, we detected species that have unique characteristics associated with hitherto unknown adaptations to diverse wood and litter substrates. Our results suggest that the terms white-rot fungi and litter decomposers mask a much larger functional diversity.

28 December 2017 in Mycological Progress
Verified
Journal Article
Closed access
PDF file
SWSheng-Hua Wu
Sheng-Hua Wu
YCYu-Ping Chen
Yu-Ping Chen
CWChia-Ling Wei
Chia-Ling Wei
DFDimitrios Floudas
Dimitrios Floudas
YDYu-Cheng Dai
Yu-Cheng Dai

1 April 2022 in Infrastructures
Verified
Journal Article
Open access
PDF file
AGAna Goidea
Ana Goidea
DFDimitrios Floudas
Dimitrios Floudas
DADavid Andréen
David Andréen
Biodesign holds the potential for radically increasing the sustainability of the built environment and our material culture but comes with new challenges. One of these is the bridging of the vast differences of scale between microbiological processes and architecture. We propose that a transcalar design approach, which weaves together nonlinear dependencies using computational design tools and design methodologies through the biological generation of architectural components, is a way towards successful design implementations. Such design processes were explored in a laboratory-based fabrication and study of a column element. This column, named Protomycokion, serves to illustrate how design methodologies, particularly through the use of a demonstrator artefact, can serve to navigate the multiple scales, disciplines, and experiments that are necessary to engage the complexities of biodesign. Transcalar design processes embrace the adaptability, variability and interdependence of biological organisms and show possible gains with regard to material sustainability and increased performativity.